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View Structure Prediction Details

Protein: gi|30260819, gi|...
Organism: Bacillus anthracis str. Ames
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260819, gi|....

Description E-value Query
Range
Subject
Range
gi|76583467, gi|... - gi|76818994|ref|YP_336949.1| sugar ABC transporter, permease protein [Burkholderia pseudomallei 1710...
4.0E-68 [7..310] [531..832]
gi|71733898, gi|... - gi|71733898|ref|YP_274918.1| ribose ABC transporter, ATP-binding protein [Pseudomonas syringae pv. p...
9.0E-52 [2..310] [318..624]
gi|6714794, gi|2... - gi|6714794|emb|CAB66286.1| bifunctional carbohydrate binding and transport protein. [Streptomyces co...
8.0E-49 [4..310] [19..323]
gi|29831861, gi|... - gi|29831861|ref|NP_826495.1| D-ribose ABC transporter permease protein [Streptomyces avermitilis MA-...
2.0E-44 [5..310] [19..322]
gi|254223025, gi... - gi|75824689|ref|ZP_00754136.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport syste...
tr|D7HAT2|D7HAT2... - Ribose ABC transporter permease OS=Vibrio cholerae RC385 GN=VCRC385_02451 PE=4 SV=1
1.0E-42 [4..310] [25..333]
gi|53987537, gi|... - gi|54020364|ref|YP_115660.1| putative ribose ABC transporter [Mycoplasma hyopneumoniae 232], gi|5398...
2.0E-42 [3..307] [280..585]
gi|75830918, gi|... - gi|75830918|ref|ZP_00760188.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport syste...
gi|229605177, gi... - gi|229605177|ref|YP_002875881.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae ...
gi|229345403, gi... - gi|229517367|ref|ZP_04406812.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae R...
gi|75815453 - gi|75815453|ref|ZP_00745961.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport syste...
gi|229352947, gi... - gi|229510502|ref|ZP_04399982.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae B...
tr|A0A023PTC2|A0... - Uncharacterized protein OS=Vibrio cholerae PE=4 SV=1, Ribose ABC transporter permease protein OS=Vib...
gi|75824937, gi|... - gi|75824937|ref|ZP_00754373.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport syste...
gi|229357055, gi... - gi|229506704|ref|ZP_04396213.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae B...
gi|227811755, gi... - gi|227811755|ref|YP_002811765.1| ribose ABC transporter, permease protein [Vibrio cholerae M66-2], g...
1.0E-41 [4..310] [25..333]
gi|229526243, gi... - gi|229526243|ref|ZP_04415647.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae b...
gi|229340016, gi... - gi|229522799|ref|ZP_04412213.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae T...
gi|229334251, gi... - gi|229527889|ref|ZP_04417280.1| ribose ABC transport system permease protein RbsC [Vibrio cholerae 1...
tr|A0A023PSC7|A0... - Uncharacterized protein OS=Vibrio cholerae PE=4 SV=1
gi|75820338, gi|... - gi|75820338|ref|ZP_00750388.1| COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport syste...
3.0E-41 [4..310] [25..333]
gi|11279048 - pir||B82497 ribose ABC transporter, permease protein VCA0129 [imported] - Vibrio cholerae (strain N1...
gi|15600900, gi|... - gi|9657517|gb|AAF96043.1| ribose ABC transporter, permease protein [Vibrio cholerae O1 biovar eltor ...
4.0E-41 [4..309] [25..332]
gi|37200771, gi|... - gi|37676230|ref|NP_936626.1| ribose ABC transporter permease protein [Vibrio vulnificus YJ016], gi|3...
9.0E-41 [4..310] [20..328]

Back

Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKGNVLQQ LGSLIGLALI IVVITALNPA FIEIPNLFNI LRQVSINALI AFGMTFVILT  60
   61 GGIDLSVGSI LALSSALVAG MMASGMDPFL AMAVGLLAG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVMGIVNGII IAKGKVAPFI ATLATMTIFR GLTLVYMDGR PITGLGDHLM FQMFGRGYFL  60
   61 GIPVPAVTMM IAFAVLYFIL KKTTFGRRTF AIGGNEEAAA LSGINVTKIK VMIYGLSGIL 120
  121 AAFAGIVLTS RLDSAQPTAG TSYELDAIAA VVLGGTSLSG GRGWIVGTFI GVLIIGVLNN 180
  181 GLNLLGVSSF FQQVVKGLVI LLAVLIDRRK EA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle