YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260544, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	219 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260544, gi|....

Description	E-value	Query Range	Subject Range
THIE_BACC1 - Thiamine-phosphate synthase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=thiE PE=3 SV=1	5.0E-43	[1..217]	[1..217]
THIE_BACHK - Thiamine-phosphate pyrophosphorylase OS=Bacillus thuringiensis subsp. konkukian GN=thiE PE=3 SV=1 THIE_BACHK - Thiamine-phosphate synthase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=thiE PE=3 S...	2.0E-42	[1..219]	[1..219]
THIE_BACCZ - Thiamine-phosphate synthase OS=Bacillus cereus (strain ZK / E33L) GN=thiE PE=3 SV=1	2.0E-42	[1..219]	[1..219]
gi\|47556041, gi\|... - gi\|47567198\|ref\|ZP_00237912.1\| thiamine-phosphate pyrophosphorylase [Bacillus cereus G9241], gi\|4755...	1.0E-40	[1..219]	[1..219]
THIE_BACWK - Thiamine-phosphate synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=thiE PE=3 SV=1	8.0E-40	[1..219]	[1..219]
gi\|15988166, gi\|... - gi\|4699825\|pdb\|2TPS\|B Chain B, Thiamin Phosphate Synthase, gi\|4699824\|pdb\|2TPS\|A Chain A, Thiamin Ph...	2.0E-39	[1..216]	[6..221]
THIE_BACSU - Thiamine-phosphate synthase OS=Bacillus subtilis (strain 168) GN=thiE PE=1 SV=1 gi\|221325317 - gi\|221325317\|ref\|ZP_03606611.1\| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp. subti... THIE_BACSU - Thiamine-phosphate synthase OS=Bacillus subtilis GN=thiE PE=1 SV=1 gi\|221316121 - gi\|221316121\|ref\|ZP_03597926.1\| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp. subti... gi\|221321032 - gi\|221321032\|ref\|ZP_03602326.1\| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp. subti...	3.0E-39	[1..216]	[1..216]
THIE_BACLD - Thiamine-phosphate synthase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC ...	5.0E-39	[1..217]	[1..217]

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Predicted Domain #1

Region A:
Residues: [1-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRISKAEMS KLLSVYFIMG SNNCTKDPLQ VLREALEGFI TIFQFREKGE GALTGEERIC  60
   61 FAKELQAICK EYGVPFIVND DVELALELDA DGVHVGQDDE GITSVREKMG DKIVGVSTHT 120
  121 IEEARWVIEN GADYLGVGPI FPTSTKKDTK AVQGTKGLAH FREQGITIPI VGIGGISIEN 180
  181 TASVIEAGAD GVSVISAISL AESAYESTKK LVEEVSRSL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.0
Match:	1g4tA
Description:	Thiamin phosphate synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
thiamin-phosphate diphosphorylase activity	6.04450222340788	bayes_pls_golite062009
catalytic activity	2.31352397210218	bayes_pls_golite062009
phosphomethylpyrimidine kinase activity	2.16632642989285	bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups	1.16976945211093	bayes_pls_golite062009
transferase activity	1.16478613213801	bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor	0.63318404518052	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: