YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39985152, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	234 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39985152, gi|....

Description	E-value	Query Range	Subject Range
gi\|77544341, gi\|... - gi\|77918258\|ref\|YP_356073.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Pelobacter carbinolicus...	192.0	[0..1]	[233..1]
gi\|78192839, gi\|... - gi\|78221584\|ref\|YP_383331.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Geobacter metallireduce...	190.0	[0..1]	[233..1]
gi\|110599477, gi... - gi\|222056874\|ref\|YP_002539236.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Geobacter sp. FRC-3...	189.0	[0..1]	[233..1]
gi\|88936780, gi\|... - gi\|88936780\|ref\|ZP_01142379.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Geobacter uraniumredu...	187.0	[0..1]	[233..1]
gi\|47552759, gi\|... - gi\|47570569\|ref\|ZP_00241189.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus G9241... gi\|228774388, gi... - gi\|228985332\|ref\|ZP_04145492.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiens... gi\|228933548, gi... - gi\|228933548\|ref\|ZP_04096399.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiens... gi\|229155826, gi... - gi\|229155826\|ref\|ZP_04283929.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus ATCC... gi\|228644572, gi... - gi\|229138947\|ref\|ZP_04267526.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus BDRD... gi\|217959753, gi... - gi\|217959753\|ref\|YP_002338305.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus c... gi\|222095838, gi... - gi\|222095838\|ref\|YP_002529895.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus Q1]...	187.0	[0..7]	[232..5]
gi\|195993604, gi... - gi\|196033924\|ref\|ZP_03101335.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus ce... gi\|167632784, gi... - gi\|167632784\|ref\|ZP_02391110.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|218537115, gi... - gi\|218903383\|ref\|YP_002451217.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus c... gi\|196022274, gi... - gi\|196046899\|ref\|ZP_03114120.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus ce... gi\|225786121, gi... - gi\|225864221\|ref\|YP_002749599.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus c... gi\|227006475, gi... - gi\|227814943\|ref\|YP_002814952.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus a... gi\|228844813, gi... - gi\|228914842\|ref\|ZP_04078450.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiens... gi\|228813843, gi... - gi\|228945861\|ref\|ZP_04108205.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiens... gi\|228661712, gi... - gi\|229121796\|ref\|ZP_04251017.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus 95/8... gi\|118416897, gi... - gi\|118477672\|ref\|YP_894823.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiensis... gi\|228598970, gi... - gi\|229184470\|ref\|ZP_04311674.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus BGSC... gi\|229603908, gi... - gi\|229603908\|ref\|YP_002866595.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus a... gi\|254684823 - gi\|254684823\|ref\|ZP_05148683.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|254722231 - gi\|254722231\|ref\|ZP_05184019.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|254737269 - gi\|254737269\|ref\|ZP_05194973.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|254743544 - gi\|254743544\|ref\|ZP_05201229.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|49477567, gi\|... - gi\|49477567\|ref\|YP_036355.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiensis ... gi\|254751585 - gi\|254751585\|ref\|ZP_05203622.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|49179024, gi\|... - gi\|49185097\|ref\|YP_028349.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Bacillus anth... gi\|254759100 - gi\|254759100\|ref\|ZP_05211127.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus an... gi\|47502685, gi\|... - gi\|47527537\|ref\|YP_018886.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Bacillus anth... gi\|30262254, gi\|... - gi\|30262254\|ref\|NP_844631.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Bacillus anth... gi\|65319547, gi\|... - gi\|65319547\|ref\|ZP_00392506.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus ant...	186.0	[0..7]	[232..5]
gi\|51976682, gi\|... - gi\|52143213\|ref\|YP_083616.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus E33L], ...	185.0	[0..7]	[232..5]
gi\|42737256, gi\|... - gi\|42781334\|ref\|NP_978581.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus ATCC 10...	185.0	[0..7]	[232..5]
gi\|228713391, gi... - gi\|229069770\|ref\|ZP_04203055.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus F651... gi\|228725365, gi... - gi\|229043983\|ref\|ZP_04191675.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus AH67... gi\|228801137, gi... - gi\|228958510\|ref\|ZP_04120230.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiens... gi\|228952582, gi... - gi\|228952582\|ref\|ZP_04114658.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus thuringiens... gi\|30020329, gi\|... - gi\|30020329\|ref\|NP_831960.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus ATCC 14... gi\|229150465, gi... - gi\|229150465\|ref\|ZP_04278681.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus m155... gi\|229144835, gi... - gi\|229144835\|ref\|ZP_04273232.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus BDRD... gi\|229127639, gi... - gi\|229127639\|ref\|ZP_04256628.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus BDRD... gi\|228673724, gi... - gi\|229109683\|ref\|ZP_04239269.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus Rock... gi\|229190326, gi... - gi\|229190326\|ref\|ZP_04317327.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus ATCC... gi\|229178609, gi... - gi\|229178609\|ref\|ZP_04305973.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bacillus cereus 1725...	184.0	[0..7]	[232..5]
gi\|49081218, gi\|... - gi\|71024687\|ref\|XP_762573.1\| hypothetical protein UM06426.1 [Ustilago maydis 521], ref\|XP_404041.1\| ...	182.0	[0..2]	[232..33]

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Predicted Domain #1

Region A:
Residues: [1-234]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGLIYLAF FIPLSGFFSF AALVGSLVDA SGGFAHRCAL AWSRIGLMMA GVRLDVSGTE  60
   61 NVPAGEPVIF MGNHQGNFDI LVLSRAIPRR FSWLAKEELF RIPLFGAAMQ RAGYIPVDRS 120
  121 DGRKALRSLD AAAKRIRAGA SVIVFPEGTR TADGSLLPFK KGGFVLAERA GVPIIPFTIN 180
  181 GSMQVNPRNT VKLVRGARIA VRFGTPIPTS GAGALKGTPL MEQVRSAIQS GLEG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	11.154902
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits