YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39983618, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	182 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39983618, gi|....

Description	E-value	Query Range	Subject Range
gi\|254852737 - gi\|254852737\|ref\|ZP_05242085.1\| orotate phosphoribosyltransferase [Listeria monocytogenes FSL R2-503... gi\|254826127 - gi\|254826127\|ref\|ZP_05231128.1\| orotate phosphoribosyltransferase [Listeria monocytogenes FSL J1-194... gi\|254878051 - gi\|254878051\|ref\|ZP_05250761.1\| orotate phosphoribosyltransferase [Listeria monocytogenes FSL J2-071... PYRE_LISMF - Orotate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pyrE PE=3 ... gi\|47093068, gi\|... - gi\|47093068\|ref\|ZP_00230846.1\| orotate phosphoribosyltransferase [Listeria monocytogenes str. 4b H78... gi\|254933303, gi... - gi\|254933303\|ref\|ZP_05266662.1\| orotate phosphoribosyltransferase [Listeria monocytogenes HPB2262], ... gi\|226224434, gi... - gi\|226224434\|ref\|YP_002758541.1\| orotate phosphoribosyltransferase [Listeria monocytogenes Clip81459...	146.0	[0..1]	[181..1]
gi\|255025732 - gi\|255025732\|ref\|ZP_05297718.1\| orotate phosphoribosyltransferase [Listeria monocytogenes FSL J2-003... gi\|254831568, gi... - gi\|254831568\|ref\|ZP_05236223.1\| orotate phosphoribosyltransferase [Listeria monocytogenes 10403S], g... gi\|224500062 - gi\|224500062\|ref\|ZP_03668411.1\| orotate phosphoribosyltransferase [Listeria monocytogenes Finland 19... gi\|47096552, gi\|... - gi\|47096552\|ref\|ZP_00234142.1\| orotate phosphoribosyltransferase [Listeria monocytogenes str. 1/2a F... gi\|153183321, gi... - gi\|254899472\|ref\|ZP_05259396.1\| orotate phosphoribosyltransferase [Listeria monocytogenes J0161], gi... gi\|254936716, gi... - gi\|254936716\|ref\|ZP_05268413.1\| orotate phosphoribosyltransferase [Listeria monocytogenes F6900], gi... gi\|153191338, gi... - gi\|254912389\|ref\|ZP_05262401.1\| orotate phosphoribosyltransferase [Listeria monocytogenes J2818], gi...	146.0	[0..1]	[181..1]
gi\|224501368 - gi\|224501368\|ref\|ZP_03669675.1\| orotate phosphoribosyltransferase [Listeria monocytogenes FSL R2-561... PYRE_LISMO - Orotate phosphoribosyltransferase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-... PYRE_LISMO - Orotate phosphoribosyltransferase OS=Listeria monocytogenes GN=pyrE PE=3 SV=1	145.0	[0..1]	[181..1]
PYRE_LISIN - Orotate phosphoribosyltransferase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=pyrE PE=3 SV... PYRE_LISIN - Orotate phosphoribosyltransferase OS=Listeria innocua GN=pyrE PE=3 SV=1	143.0	[0..1]	[181..1]
PYRE_PYRHO - Orotate phosphoribosyltransferase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 997... PYRE_PYRHO - Orotate phosphoribosyltransferase OS=Pyrococcus horikoshii GN=pyrE PE=3 SV=1	143.0	[0..1]	[180..1]
PYRE_ACIAD - Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRT) (OPRTase) - Acinetobacter sp. (strain ADP1)	142.0	[0..6]	[181..33]
gi\|89093848, gi\|... - gi\|89093848\|ref\|ZP_01166794.1\| orotate phosphoribosyltransferase [Oceanospirillum sp. MED92], gi\|890...	142.0	[0..3]	[181..5]
PYRE_SALCH - Orotate phosphoribosyltransferase OS=Salmonella choleraesuis GN=pyrE PE=3 SV=1 PYRE_SALCH - Orotate phosphoribosyltransferase OS=Salmonella choleraesuis (strain SC-B67) GN=pyrE PE=3 SV=1 lcl\|NC_016856.1_... - [gene=pyrE] [protein=orotate phosphoribosyltransferase] [protein_id=YP_005239975.1] [location=comple... PYRE_SALHS - Orotate phosphoribosyltransferase OS=Salmonella heidelberg (strain SL476) GN=pyrE PE=3 SV=1 PYRE_SALSV - Orotate phosphoribosyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=pyrE PE=3 SV=1 gi\|197262316, gi... - gi\|197262316\|ref\|ZP_03162390.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enteri... PYRE_SALDC - Orotate phosphoribosyltransferase OS=Salmonella dublin (strain CT_02021853) GN=pyrE PE=3 SV=1 gi\|205350134, gi... - gi\|205350134\|gb\|EDZ36765.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... gi\|195632230, gi... - gi\|195632230\|gb\|EDX50714.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... gi\|205344664, gi... - gi\|205344664\|gb\|EDZ31428.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... PYRE_SALNS - Orotate phosphoribosyltransferase OS=Salmonella newport (strain SL254) GN=pyrE PE=3 SV=1 PYRE_SALPB - Orotate phosphoribosyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pyrE PE... gi\|205325874, gi... - gi\|205325874\|gb\|EDZ13713.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... gi\|167995206, gi... - gi\|205327073\|gb\|EDZ13837.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... PYRE_SALCH - Orotate phosphoribosyltransferase OS=Salmonella choleraesuis GN=pyrE PE=3 SV=1 gi\|197291365, gi... - gi\|197291365\|gb\|EDY30717.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... gi\|168241912, gi... - gi\|205338713\|gb\|EDZ25477.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enterica s... PYRE_SALPB - Orotate phosphoribosyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pyrE PE... PYRE_SALTY - Orotate phosphoribosyltransferase OS=Salmonella typhimurium GN=pyrE PE=1 SV=3 PYRE_SALPC - Orotate phosphoribosyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=pyrE PE=3 SV=1 PYRE_SALTY - Orotate phosphoribosyltransferase OS=Salmonella typhimurium GN=pyrE PE=1 SV=3 gi\|200387791, gi... - gi\|200387791\|ref\|ZP_03214403.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enteri... PYRE_SALTY - Orotate phosphoribosyltransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN... gi\|204928498, gi... - gi\|204928498\|ref\|ZP_03219697.1\| orotate phosphoribosyltransferase [Salmonella enterica subsp. enteri... PYRE_SALG2 - Orotate phosphoribosyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pyrE PE=3... PYRE_SALEP - Orotate phosphoribosyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=pyrE PE=3 SV=1	141.0	[0..3]	[182..5]
PYRE_MARHV - Orotate phosphoribosyltransferase OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11...	141.0	[0..3]	[181..5]
PYRE_PHOLL - Orotate phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / C... PYRE_PHOLL - Orotate phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=pyrE PE=3 SV=1	141.0	[0..3]	[181..5]

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Predicted Domain #1

Region A:
Residues: [1-182]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKDRLKQI ILELSYEKRK VILASGRESD FYFDGKQTTL HAEGGLLVGK LFYEAIKDVE  60
   61 GVQGVGGITL GADPIATATS IAAFLDGRPM HAFIIRKEPK GHGTGQWLEG RKNLPPGSKV 120
  121 VIVEDVVTTG GSSMKAVKRA EEEGLKVLCI VSLVDREEGG RENIEQEGYE LRTIFTKSEL 180
  181 LA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.522879
Match:	2p1zA
Description:	No description for 2p1zA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits