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View Structure Prediction Details

Protein: gi|39996542, gi|...
Organism: Geobacter sulfurreducens PCA
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996542, gi|....

Description E-value Query
Range
Subject
Range
gi|85093349 - gi|85093349|ref|XP_959676.1| hypothetical protein [Neurospora crassa OR74A]
gi|32416722, gi|... - gi|32416722|ref|XP_328839.1| hypothetical protein [Neurospora crassa], gi|28921124|gb|EAA30440.1| hy...
239.0 [0..26] [232..63]
BCA2_ARATH - Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=BCA2 PE=1 SV=3
238.0 [0..20] [230..106]
gi|39970265, gi|... - gi|39970265|ref|XP_366523.1| hypothetical protein MG02599.4 [Magnaporthe grisea 70-15], gb|EAA47356....
234.0 [0..24] [232..101]
gi|82404653, gi|... - gi|82497288|ref|ZP_00882844.1| Carbonate dehydratase [Shewanella sp. MR-4], gi|82404653|gb|EAP45337....
233.0 [0..39] [230..4]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRSSMVRG MFLGAGAVAI SAVLAFGSGG VGVTADEALQ QLMDGNKRYV AGQMKTCSAS  60
   61 DTAKRESLAK GQKPYAIILS CSDSRVPPEI IFDKTMGEIF VVRVAGNIPD PVVLGSIEYA 120
  121 AEHIGSPLVM VLGHERCGAV TATVEAKGKA EGNIGSIVKT IAPAAAKALK EGKGKSKAEV 180
  181 VEAATDANLD LVAASLTKKS PVIRHLVKEG TLKIVKAKYD LDDGTVVLMD GKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.0
Match: 2a5vA
Description: Crystal structure of M. tuberculosis beta carbonic anhydrase, Rv3588c, tetrameric form
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle