YRC Public Data Repository - Protein Structure Prediction

Protein:	COAE_GEOSL
Organism:	Geobacter sulfurreducens PCA
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COAE_GEOSL.

Description	E-value	Query Range	Subject Range
COAE_CARHZ - Dephospho-CoA kinase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) ...	187.0	[0..3]	[193..6]
gi\|47214587 - gi\|47214587\|emb\|CAG00941.1\| unnamed protein product [Tetraodon nigroviridis]	186.0	[0..1]	[195..1]
gi\|115934484, gi... - gi\|72014803\|ref\|XP_782468.1\| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus], gi\|115...	184.0	[0..1]	[195..1]
COAE_GEOKA - Dephospho-CoA kinase OS=Geobacillus kaustophilus (strain HTA426) GN=coaE PE=3 SV=1 COAE_GEOKA - Dephospho-CoA kinase OS=Geobacillus kaustophilus GN=coaE PE=3 SV=1	184.0	[0..4]	[194..5]
COAE_ORYSJ - Dephospho-CoA kinase OS=Oryza sativa subsp. japonica GN=Os01g0360600 PE=2 SV=1	183.0	[0..1]	[194..1]
COAE_ARATH - Dephospho-CoA kinase OS=Arabidopsis thaliana GN=COAE PE=2 SV=1	181.0	[0..1]	[195..1]
gi\|170129492, gi... - gi\|170705367\|ref\|ZP_02895831.1\| dephospho-CoA kinase [Bacillus anthracis str. A0389], gi\|170129492\|g... gi\|177651154, gi... - gi\|177651154\|ref\|ZP_02933985.1\| dephospho-CoA kinase [Bacillus anthracis str. A0174], gi\|172082980\|g... gi\|190569055, gi... - gi\|190569055\|ref\|ZP_03021955.1\| dephospho-CoA kinase [Bacillus anthracis Tsiankovskii-I], gi\|1905598... gi\|195994611, gi... - gi\|196033182\|ref\|ZP_03100595.1\| dephospho-CoA kinase [Bacillus cereus W], gi\|195994611\|gb\|EDX58566.1... gi\|165869838, gi... - gi\|165869838\|ref\|ZP_02214496.1\| dephospho-CoA kinase [Bacillus anthracis str. A0488], gi\|164714667\|g... COAE_BACAN - Dephospho-CoA kinase OS=Bacillus anthracis GN=coaE PE=3 SV=1 gi\|167634058, gi... - gi\|167634058\|ref\|ZP_02392381.1\| dephospho-CoA kinase [Bacillus anthracis str. A0442], gi\|167530859\|g... gi\|167638018, gi... - gi\|167638018\|ref\|ZP_02396296.1\| dephospho-CoA kinase [Bacillus anthracis str. A0193], gi\|167513835\|g... gi\|170670396, gi... - gi\|170685932\|ref\|ZP_02877155.1\| dephospho-CoA kinase [Bacillus anthracis str. A0465], gi\|170670396\|g... gi\|49187474, gi\|... - gi\|49187474\|ref\|YP_030726.1\| dephospho-CoA kinase [Bacillus anthracis str. Sterne], gi\|49181401\|gb\|A... gi\|47505272, gi\|... - gi\|47530124\|ref\|YP_021473.1\| dephospho-CoA kinase [Bacillus anthracis str. 'Ames Ancestor'], gi\|4750... gi\|30259329, gi\|... - gi\|30264654\|ref\|NP_847031.1\| dephospho-CoA kinase [Bacillus anthracis str. Ames], gi\|30259329\|gb\|AAP... gi\|21402627 - ref\|NP_658612.1\| CoaE, Dephospho-CoA kinase [Bacillus anthracis str. A2012] gi\|227817368, gi... - gi\|227817368\|ref\|YP_002817377.1\| dephospho-CoA kinase [Bacillus anthracis str. CDC 684], gi\|22700622... gi\|254687391 - gi\|254687391\|ref\|ZP_05151247.1\| dephospho-CoA kinase [Bacillus anthracis str. CNEVA-9066] gi\|254724954 - gi\|254724954\|ref\|ZP_05186737.1\| dephospho-CoA kinase [Bacillus anthracis str. A1055] gi\|228811295, gi... - gi\|228948308\|ref\|ZP_04110591.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar monterrey BGSC ... gi\|229600948, gi... - gi\|229600948\|ref\|YP_002868863.1\| dephospho-CoA kinase [Bacillus anthracis str. A0248], gi\|229265356\|... gi\|254754674 - gi\|254754674\|ref\|ZP_05206709.1\| dephospho-CoA kinase [Bacillus anthracis str. Vollum] gi\|254757506 - gi\|254757506\|ref\|ZP_05209533.1\| dephospho-CoA kinase [Bacillus anthracis str. Australia 94] gi\|254736691 - gi\|254736691\|ref\|ZP_05194397.1\| dephospho-CoA kinase [Bacillus anthracis str. Western North America ... gi\|254741728 - gi\|254741728\|ref\|ZP_05199415.1\| dephospho-CoA kinase [Bacillus anthracis str. Kruger B]	181.0	[0..3]	[194..4]
gi\|65321951 - gi\|65321951\|ref\|ZP_00394910.1\| COG0237: Dephospho-CoA kinase [Bacillus anthracis str. A2012] gi\|228917222, gi... - gi\|228917222\|ref\|ZP_04080779.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar pulsiensis BGSC... gi\|229124150, gi... - gi\|229124150\|ref\|ZP_04253342.1\| Dephospho-CoA kinase [Bacillus cereus 95/8201], gi\|228659452\|gb\|EEL1... gi\|228830018, gi... - gi\|228929631\|ref\|ZP_04092649.1\| Dephospho-CoA kinase [Bacillus thuringiensis serovar pondicheriensis...	181.0	[0..1]	[194..1]
gi\|88923573, gi\|... - gi\|88946929\|ref\|ZP_01149991.1\| Dephospho-CoA kinase [Desulfotomaculum reducens MI-1], gi\|88923573\|gb...	181.0	[0..2]	[196..1]
COAE_BACCZ - Dephospho-CoA kinase OS=Bacillus cereus (strain ZK / E33L) GN=coaE PE=3 SV=1	180.0	[0..3]	[194..4]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIIGLTGGI ASGKSTVSRI LERLGAVVID ADQLAREAVM PGTSAHRSIV AAFGEGILLP  60
   61 DGAIDRKALG SIIFADSSAR KRLEAITHPA IRDLAELRLA ELRRSGVPVA VYMAALLIEA 120
  121 GATDRVDEVW VVYVDRETQV RRVMARDGLS RSEAEQRLAA QMPMEEKAAR GQVVIDNNGT 180
  181 PEELERRIEE IWAKRFP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.69897
Match:	1vhlA
Description:	Crystal structure of dephospho-CoA kinase with adenosine-5'-diphosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.00104173493322	bayes_pls_golite062009
dephospho-CoA kinase activity	0.656417599253142	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: