YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29655368, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	274 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29655368, gi|....

Description	E-value	Query Range	Subject Range
gi\|94492651, gi\|... - gi\|94492651\|ref\|ZP_01299858.1\| hypothetical protein CburD_01000233 [Coxiella burnetii Dugway 7E9-12]... gi\|120575304, gi... - gi\|153209619\|ref\|ZP_01947457.1\| pyrroline-5-carboxylate reductase [Coxiella burnetii 'MSU Goat Q177'... gi\|165916367, gi... - gi\|165924191\|ref\|ZP_02220023.1\| pyrroline-5-carboxylate reductase [Coxiella burnetii RSA 334], gi\|16... gi\|212013850, gi... - gi\|212219588\|ref\|YP_002306375.1\| pyrroline-5-carboxylate reductase [Coxiella burnetii CbuK_Q154], gi...	199.0	[0..1]	[274..1]
gi\|167532035, gi... - gi\|167631737\|ref\|ZP_02390064.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0442], g... gi\|167514661, gi... - gi\|167637154\|ref\|ZP_02395434.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0193], g... gi\|170671266, gi... - gi\|170685006\|ref\|ZP_02876231.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0465], g... gi\|170705216, gi... - gi\|170705216\|ref\|ZP_02895681.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0389], g... gi\|177649865, gi... - gi\|177649865\|ref\|ZP_02932866.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0174], g... gi\|49185927, gi\|... - gi\|49185927\|ref\|YP_029179.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Sterne], gi\|... gi\|47503581, gi\|... - gi\|47528433\|ref\|YP_019782.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. 'Ames Ancest... gi\|30263087, gi\|... - gi\|30263087\|ref\|NP_845464.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Ames], gi\|30... gi\|254760978 - gi\|254760978\|ref\|ZP_05213002.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Australia... gi\|254752460 - gi\|254752460\|ref\|ZP_05204496.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Vollum] gi\|21401019, gi\|... - gi\|65320395\|ref\|ZP_00393354.1\| COG0345: Pyrroline-5-carboxylate reductase [Bacillus anthracis str. A... gi\|254742684 - gi\|254742684\|ref\|ZP_05200369.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Kruger B] gi\|254738146 - gi\|254738146\|ref\|ZP_05195849.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Western N... gi\|254685679 - gi\|254685679\|ref\|ZP_05149538.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. CNEVA-906... gi\|229600273, gi... - gi\|229600273\|ref\|YP_002867357.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0248], ...	188.0	[0..2]	[270..1]
gi\|218541204, gi... - gi\|218898056\|ref\|YP_002446467.1\| pyrroline-5-carboxylate reductase [Bacillus cereus G9842], gi\|21854... gi\|228858122, gi... - gi\|228901519\|ref\|ZP_04065702.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 4222],... gi\|228908746, gi... - gi\|228908746\|ref\|ZP_04072580.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 200], ... gi\|75764862, gi\|... - gi\|75764862\|ref\|ZP_00744228.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar isr...	187.0	[0..2]	[274..1]
gi\|107099379 - gi\|107099379\|ref\|ZP_01363297.1\| hypothetical protein PaerPA_01000391 [Pseudomonas aeruginosa PACS2] gi\|116054124, gi... - gi\|53727118\|ref\|ZP_00140829.2\| COG0345: Pyrroline-5-carboxylate reductase [Pseudomonas aeruginosa UC... gi\|218889135, gi... - gi\|218889135\|ref\|YP_002437999.1\| pyrroline-5-carboxylate reductase [Pseudomonas aeruginosa LESB58], ...	187.0	[0..1]	[274..1]
gi\|94499758, gi\|... - gi\|94499758\|ref\|ZP_01306294.1\| pyrroline-5-carboxylate reductase [Oceanobacter sp. RED65], gi\|944279...	187.0	[0..4]	[273..2]
gi\|84324480, gi\|... - gi\|84324480\|ref\|ZP_00972538.1\| COG0345: Pyrroline-5-carboxylate reductase [Pseudomonas aeruginosa 21... gi\|126169303, gi... - gi\|84318691\|ref\|ZP_00967112.1\| COG0345: Pyrroline-5-carboxylate reductase [Pseudomonas aeruginosa C3...	187.0	[0..1]	[274..1]
P5CR_PSEAE - Pyrroline-5-carboxylate reductase OS=Pseudomonas aeruginosa GN=proC PE=1 SV=2 P5CR_PSEAE - Pyrroline-5-carboxylate reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101...	187.0	[0..1]	[274..1]
gi\|42782087, gi\|... - gi\|42782087\|ref\|NP_979334.1\| pyrroline-5-carboxylate reductase [Bacillus cereus ATCC 10987], gi\|4273...	186.0	[0..2]	[274..1]
gi\|163862929, gi... - gi\|89208025\|ref\|ZP_01186549.1\| Delta 1-pyrroline-5-carboxylate reductase [Bacillus weihenstephanensi...	186.0	[0..2]	[274..1]
gi\|49480085, gi\|... - gi\|49480085\|ref\|YP_037223.1\| pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar konku...	186.0	[0..2]	[269..1]

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Predicted Domain #1

Region A:
Residues: [1-274]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTSNITFIG GGNMARNIVV GLIANGYDPN RICVTNRSLD KLDFFKEKCG VHTTQDNRQG  60
   61 ALNADVVVLA VKPHQIKMVC EELKDILSET KILVISLAVG VTTPLIEKWL GKASRIVRAM 120
  121 PNTPSSVRAG ATGLFANETV DKDQKNLAES IMRAVGLVIW VSSEDQIEKI AALSGSGPAY 180
  181 IFLIMEALQE AAEQLGLTKE TAELLTEQTV LGAARMALET EQSVVQLRQF VTSPGGTTEQ 240
  241 AIKVLESGNL RELFIKALTA AVNRAKELSK TVDQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.69897
Match:	2izzA
Description:	No description for 2izzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits