YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29655326, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	290 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29655326, gi|....

Description	E-value	Query Range	Subject Range
METF_AQUAE - 5,10-methylenetetrahydrofolate reductase OS=Aquifex aeolicus GN=metF PE=3 SV=1 METF_AQUAE - 5,10-methylenetetrahydrofolate reductase OS=Aquifex aeolicus (strain VF5) GN=metF PE=3 SV=1	373.0	[0..1]	[278..7]
METF_ERWCA - (P71319) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) METF_PECCC - 5,10-methylenetetrahydrofolate reductase OS=Pectobacterium carotovorum subsp. carotovorum GN=metF PE...	372.0	[0..3]	[282..20]
gi\|93352969, gi\|... - gi\|94309117\|ref\|YP_582327.1\| 5,10-methylenetetrahydrofolate reductase [Ralstonia metallidurans CH34]...	372.0	[0..4]	[279..2]
gi\|50123164, gi\|... - gi\|50123164\|ref\|YP_052331.1\| 5,10-methylenetetrahydrofolate reductase [Pectobacterium atrosepticum S...	370.0	[0..3]	[282..20]
gi\|73539921, gi\|... - gi\|73539921\|ref\|YP_294441.1\| 5,10-methylenetetrahydrofolate reductase [Ralstonia eutropha JMP134], g...	370.0	[0..4]	[279..2]
gi\|113866277, gi... - gi\|113866277\|ref\|YP_724766.1\| 5,10-methylenetetrahydrofolate reductase [Ralstonia eutropha H16], gi\|...	369.0	[0..4]	[279..2]
gi\|42554286, gi\|... - gi\|46136113\|ref\|XP_389748.1\| hypothetical protein FG09572.1 [Gibberella zeae PH-1], gi\|42554286\|gb\|E...	367.0	[0..2]	[283..12]
gi\|77960049 - gi\|77960049\|ref\|ZP_00823947.1\| COG0685: 5,10-methylenetetrahydrofolate reductase [Yersinia mollareti...	367.0	[0..3]	[281..20]
gi\|209401006, gi... - gi\|209401006\|ref\|YP_002273464.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 ... gi\|217322146, gi... - gi\|217325925\|ref\|ZP_03442009.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 s... gi\|195937592 - gi\|195937592\|ref\|ZP_03082974.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 s... gi\|208809405, gi... - gi\|208809405\|ref\|ZP_03251742.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 s... gi\|208812383, gi... - gi\|208812383\|ref\|ZP_03253712.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 s... gi\|208740595, gi... - gi\|208820472\|ref\|ZP_03260792.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 s... gi\|168775214, gi... - gi\|187769131\|gb\|EDU32975.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|254795947, gi... - gi\|254795947\|ref\|YP_003080784.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 ... gi\|168780869, gi... - gi\|189001450\|gb\|EDU70436.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|13364346, gi\|... - gi\|15834124\|ref\|NP_312897.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7], gi... gi\|189373373, gi... - gi\|189373373\|gb\|EDU91789.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|209752156, gi... - pir\|\|B86085 5,10-methylenetetrahydrofolate reductase [imported] - Escherichia coli (strain O157:H7, ... gi\|189378095, gi... - gi\|189378095\|gb\|EDU96511.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|13364346, gi\|... - gi\|15834124\|ref\|NP_312897.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str.... gi\|188016841, gi... - gi\|188016841\|gb\|EDU54963.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|15804538, gi\|... - gi\|15804538\|ref\|NP_290578.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 EDL9... gi\|168755636, gi... - gi\|189357126\|gb\|EDU75545.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|168761666, gi... - gi\|189367866\|gb\|EDU86282.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ... gi\|189362673, gi... - gi\|189362673\|gb\|EDU81092.1\| 5,10-methylenetetrahydrofolate reductase [Escherichia coli O157:H7 str. ...	367.0	[0..3]	[281..20]
gi\|29139453, gi\|... - gi\|29143817\|ref\|NP_807159.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. en... gi\|224585920, gi... - gi\|224585920\|ref\|YP_002639719.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp... gi\|213852568 - gi\|213852568\|ref\|ZP_03382100.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|214003408 - gi\|214003408\|ref\|ZP_03414143.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|213616085 - gi\|213616085\|ref\|ZP_03371911.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|213648185 - gi\|213648185\|ref\|ZP_03378238.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|213052149 - gi\|213052149\|ref\|ZP_03345027.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|213427048 - gi\|213427048\|ref\|ZP_03359798.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|197364878, gi... - gi\|197364878\|ref\|YP_002144515.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp... gi\|204320753, gi... - gi\|204930349\|ref\|ZP_03221326.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp.... gi\|205341831, gi... - gi\|205341831\|gb\|EDZ28595.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. ent... gi\|194710344, gi... - gi\|194734842\|ref\|YP_002117027.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp... gi\|168262985, gi... - gi\|205348075\|gb\|EDZ34706.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. ent... gi\|168467455, gi... - gi\|195630149\|gb\|EDX48789.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. ent... gi\|161366610, gi... - gi\|161617246\|ref\|YP_001591211.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp... gi\|168237734, gi... - gi\|197289383\|gb\|EDY28748.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. ent... gi\|62130200, gi\|... - gi\|62182567\|ref\|YP_218984.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. en... gi\|56415951, gi\|... - gi\|56415951\|ref\|YP_153026.1\| 5,10-methylenetetrahydrofolate reductase [Salmonella enterica subsp. en...	367.0	[0..3]	[281..20]

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Predicted Domain #1

Region A:
Residues: [1-290]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASHLSLSF ELFPPKTLTG FENLKSVWRT LQDKTPDYFS VTFGAGGGNQ DKTMRVVRAL  60
   61 RQDFIEVAPH LTCIGLSKTA IFDLLNNYRL LGIKRIVALR GDLPLEEDIA GGDFNHANEL 120
  121 VAYIRKLTGD YFHIEVAAYP EFHPETRTVQ EALKNFQQKI AAGANGAITQ YFYNRDAYFN 180
  181 FVDACRNVGI EAPIVPGIMP ISDFDKLVRF SKTCATEIPR WLYKRLESYK NDKASLKAYG 240
  241 VEVVTKLCED LIAYGVPGLH FYTLNQCEPT QTIIENLQSI TSFREQAVVA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	102.0
Match:	1zp3A
Description:	E. coli Methylenetetrahydrofolate Reductase (oxidized)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits