YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29542283, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	154 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29542283, gi|....

Description	E-value	Query Range	Subject Range
gi\|229350205, gi... - gi\|229512695\|ref\|ZP_04402163.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229346649, gi... - gi\|229516223\|ref\|ZP_04405671.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|227116705, gi... - gi\|227116705\|ref\|YP_002818601.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio cho... gi\|229506906, gi... - gi\|229506906\|ref\|ZP_04396414.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229335216, gi... - gi\|229527208\|ref\|ZP_04416601.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229369074, gi... - gi\|229606419\|ref\|YP_002877067.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio c... gi\|121729646, gi... - gi\|121729646\|ref\|ZP_01682123.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|229341869, gi... - gi\|229520984\|ref\|ZP_04410405.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229524744, gi... - gi\|229524744\|ref\|ZP_04414149.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229509279, gi... - gi\|229509279\|ref\|ZP_04398762.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|254851431, gi... - gi\|254851431\|ref\|ZP_05240781.1\| acetyl-CoA carboxylase [Vibrio cholerae MO10], gi\|254847136\|gb\|EET25... gi\|9654707, gi\|1... - gi\|9654707\|gb\|AAF93470.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio cholerae O... gi\|11354377 - pir\|\|G82341 acetyl-CoA carboxylase, biotin carboxyl carrier protein VC0296 [imported] - Vibrio chole... gi\|254286232, gi... - gi\|254286232\|ref\|ZP_04961191.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|148873102, gi... - gi\|153831417\|ref\|ZP_01984084.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|153827378, gi... - gi\|153827378\|ref\|ZP_01980045.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|227080510, gi... - gi\|227080510\|ref\|YP_002809061.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio cho...	141.0	[0..1]	[151..44]
gi\|94491665 - gi\|94491665\|ref\|ZP_01298875.1\| hypothetical protein CburD_01001057 [Coxiella burnetii Dugway 7E9-12] gi\|209363745, gi... - gi\|209363745\|ref\|YP_001423700.2\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Coxiella... gi\|212012211, gi... - gi\|212217949\|ref\|YP_002304736.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Coxiella... gi\|212211768, gi... - gi\|212211768\|ref\|YP_002302704.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Coxiella...	138.0	[0..2]	[154..20]
gi\|83699281 - gi\|83699281\|dbj\|BAE54378.1\| pyruvate carboxylase biotin-containing subunit [Pelotomaculum thermoprop...	136.0	[0..1]	[152..483]
gi\|56180395, gi\|... - gi\|56461385\|ref\|YP_156666.1\| Acetyl-CoA carboxylase, biotin carboxyl carrier protein [Idiomarina loi...	135.0	[0..1]	[151..1]
gi\|53753288, gi\|... - gi\|54293456\|ref\|YP_125871.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein [Legionella pneu...	134.0	[0..1]	[151..1]
gi\|52840708, gi\|... - gi\|52840708\|ref\|YP_094507.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein [Legionella pneu...	134.0	[0..1]	[151..1]
gi\|53750283, gi\|... - gi\|54296498\|ref\|YP_122867.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein [Legionella pneu...	134.0	[0..1]	[151..1]
gi\|83573282, gi\|... - gi\|83590368\|ref\|YP_430377.1\| pyruvate carboxylase subunit B [Moorella thermoacetica ATCC 39073], gi\|...	134.0	[0..1]	[153..495]
gi\|75228621 - gi\|75228621\|ref\|ZP_00715246.1\| COG0511: Biotin carboxyl carrier protein [Escherichia coli B7A]	133.0	[0..1]	[151..1]
gi\|53804796, gi\|... - gi\|53804796\|ref\|YP_113520.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Methylococcus ...	132.0	[0..1]	[151..1]

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Predicted Domain #1

Region A:
Residues: [1-154]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIRKIKKLI ELINETGVGE IEVKSGEESV RISRFPTQTI APTVPSFAPP SETTFQKPAV  60
   61 AEKMPLKEAE EPPEGHRVKS PMVGTVYLAP TPGAKPFVEV GQRVSVGDTI CLIEAMKMYN 120
  121 KIEADKSGVI SARLVENEQP VEFDQPLFII ESNE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.69897
Match:	1a6xA
Description:	STRUCTURE OF THE APO-BIOTIN CARBOXYL CARRIER PROTEIN (APO-BCCP87) OF ESCHERICHIA COLI ACETYL-COA CARBOXYLASE, NMR, 49 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
acetyl-CoA carboxylase activity	10.7856398099075	bayes_pls_golite062009
CoA carboxylase activity	10.0090741810507	bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds	9.84466409837462	bayes_pls_golite062009
ligase activity	5.03219018024593	bayes_pls_golite062009
catalytic activity	1.39099902011318	bayes_pls_golite062009
dihydrolipoyllysine-residue acetyltransferase activity	0.77123283777817	bayes_pls_golite062009
S-acetyltransferase activity	0.62484336481352	bayes_pls_golite062009
dihydrolipoamide S-acyltransferase activity	0.61155119443764	bayes_pls_golite062009
S-acyltransferase activity	0.14278235106683	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: