YRC Public Data Repository - Protein Structure Prediction

Protein:	SCPBL_COXBU
Organism:	Coxiella burnetii RSA 493
Length:	209 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCPBL_COXBU.

Description	E-value	Query Range	Subject Range
gi\|161762728, gi... - gi\|95926386\|ref\|ZP_01309177.1\| hypothetical protein CburR_01001802 [Coxiella burnetii RSA 331], gi\|1...	258.0	[0..1]	[209..1]
gi\|21113348, gi\|... - gi\|21231652\|ref\|NP_637569.1\| hypothetical protein XCC2213 [Xanthomonas campestris pv. campestris str... gi\|66768226, gi\|... - gi\|66768226\|ref\|YP_242988.1\| hypothetical protein XC_1905 [Xanthomonas campestris pv. campestris str...	238.0	[0..1]	[208..26]
gi\|21108564, gi\|... - gi\|21243052\|ref\|NP_642634.1\| hypothetical protein XAC2317 [Xanthomonas axonopodis pv. citri str. 306...	233.0	[0..1]	[207..13]
gi\|22994268, gi\|... - gi\|71276225\|ref\|ZP_00652504.1\| Conserved hypothetical protein 281 [Xylella fastidiosa Dixon], gi\|711... gi\|170730717, gi... - gi\|170730717\|ref\|YP_001776150.1\| putative transcriptional regulator [Xylella fastidiosa M12], gi\|167... gi\|71898736, gi\|... - gi\|71898736\|ref\|ZP_00680905.1\| Conserved hypothetical protein 281 [Xylella fastidiosa Ann-1], gi\|717...	231.0	[0..6]	[183..15]
gi\|15839043, gi\|... - gi\|9107648\|gb\|AAF85251.1\|AE004054_3 conserved hypothetical protein [Xylella fastidiosa 9a5c], gi\|158... gi\|11360842 - pir\|\|H82554 conserved hypothetical protein XF2452 [imported] - Xylella fastidiosa (strain 9a5c)	230.0	[0..6]	[183..15]
gi\|28199351, gi\|... - gi\|28199351\|ref\|NP_779665.1\| hypothetical protein PD1470 [Xylella fastidiosa Temecula1], gi\|28057457... gi\|182632187, gi... - gi\|182682077\|ref\|YP_001830237.1\| segregation and condensation protein B [Xylella fastidiosa M23], gi...	229.0	[0..6]	[183..15]
gi\|22997293, gi\|... - gi\|71901987\|ref\|ZP_00684036.1\| Conserved hypothetical protein 281 [Xylella fastidiosa Ann-1], gi\|717...	228.0	[0..6]	[183..15]
gi\|28852259, gi\|... - gi\|28869019\|ref\|NP_791638.1\| hypothetical protein PSPTO_1813 [Pseudomonas syringae pv. tomato str. D... tr\|Q885L8\|Q885L8... - Uncharacterized protein OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_1813 PE=3 SV=1	228.0	[0..5]	[209..8]
gi\|24986229, gi\|... - gi\|26991182\|ref\|NP_746607.1\| hypothetical protein PP_4497 [Pseudomonas putida KT2440], gi\|24986229\|g...	227.0	[0..5]	[207..30]
gi\|78048072, gi\|... - gi\|78048072\|ref\|YP_364247.1\| hypothetical protein XCV2516 [Xanthomonas campestris pv. vesicatoria st...	227.0	[0..1]	[187..26]

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Predicted Domain #1

Region A:
Residues: [1-209]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVNPKIVI EAALFASAEP LTPERLQQLF DEQNPISLSE IKNLLSELKE DYRERGVDLQ  60
   61 EVASGYRFQA RPDFSPWLQR LWEKKPARYS RALLETLALI VYRQPISRGE IEEVRGVAVS 120
  121 SDIIKKLLDR EWISVVAHRD VPGKPALFGT TKTFLDYFNL KSLEELPPLE DVVDLEKIEA 180
  181 QFGEQLALVV EKKAAEGTEP SALPLAEED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.522879
Match:	2z99A
Description:	No description for 2z99A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits