YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29654160, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654160, gi|....

Description	E-value	Query Range	Subject Range
gi\|20906180, gi\|... - gi\|21227775\|ref\|NP_633697.1\| galactoside-O-acetyltransferase [Methanosarcina mazei Go1], gi\|20906180...	149.0	[0..3]	[177..57]
gi\|110622356, gi... - gi\|147919304\|ref\|YP_686960.1\| maltose o-acetyltransferase [uncultured methanogenic archaeon RC-I], g...	144.0	[0..6]	[171..17]
ATRF2_STAHJ - Putative acetyltransferase SH0499 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0499 PE=3 SV...	143.0	[0..5]	[175..17]
gi\|47076758 - gi\|47076758\|dbj\|BAD18302.1\| maltose transacetylase [Geobacillus stearothermophilus]	143.0	[0..6]	[171..18]
gi\|56420456, gi\|... - gi\|56420456\|ref\|YP_147774.1\| maltose transacetylase (maltose O-acetyltransferase) [Geobacillus kaust... gi\|149242849, gi... - gi\|47076807\|dbj\|BAD18348.1\| maltose transacetylase [Geobacillus kaustophilus], gi\|149242850\|pdb\|2P2O...	142.0	[0..6]	[171..18]
ATRF2_STAA1 - Putative acetyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=SAHV_2539 PE=3 SV=... gi\|147742056, gi... - gi\|90584606\|ref\|ZP_01240319.1\| transferase hexapeptide repeat [Staphylococcus aureus subsp. aureus J... gi\|269204188\|ref... - galactoside O-acetyltransferase [Staphylococcus aureus subsp. aureus ED98] ATRF2_STAAN - Putative acetyltransferase SA2342 OS=Staphylococcus aureus (strain N315) GN=SA2342 PE=1 SV=1 gi\|253316061 - gi\|253316061\|ref\|ZP_04839274.1\| hypothetical protein SauraC_07932 [Staphylococcus aureus subsp. aure... gi\|255007327 - gi\|255007327\|ref\|ZP_05145928.2\| hypothetical protein SauraM_12680 [Staphylococcus aureus subsp. aure... ATRF2_STAAU - Putative acetyltransferase - Staphylococcus aureus ATRF2_STAAM - Putative acetyltransferase SAV2555 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2555 P... gi\|90428887, gi\|... - gi\|90581891\|ref\|ZP_01237656.1\| transferase hexapeptide repeat [Staphylococcus aureus subsp. aureus J...	141.0	[0..5]	[172..17]
gi\|60494967, gi\|... - gi\|60683533\|ref\|YP_213677.1\| putative thiogalactoside transacetylase [Bacteroides fragilis NCTC 9343...	141.0	[0..5]	[176..18]
gi\|20089402, gi\|... - gi\|20089402\|ref\|NP_615477.1\| maltose O-acetyltransferase [Methanosarcina acetivorans C2A], gi\|199142...	140.0	[0..5]	[177..25]
gi\|221141437 - gi\|221141437\|ref\|ZP_03565930.1\| putative acetyltransferase [Staphylococcus aureus subsp. aureus str.... ATRF2_STAAR - Putative acetyltransferase SAR2635 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2635 PE=3 SV=1 gi\|221137997 - gi\|221137997\|ref\|ZP_03562799.1\| putative acetyltransferase [Staphylococcus aureus subsp. aureus str.... gi\|227556602, gi... - gi\|227556602\|ref\|ZP_03986649.1\| galactoside O-acetyltransferase [Staphylococcus aureus subsp. aureus... gi\|227898655, gi... - gi\|227898655\|ref\|ZP_04016460.1\| galactoside O-acetyltransferase [Staphylococcus aureus subsp. aureus...	140.0	[0..5]	[172..17]
gi\|227189645, gi... - gi\|227532728\|ref\|ZP_03962777.1\| maltose O-acetyltransferase [Lactobacillus paracasei subsp. paracase... gi\|62515029 - gi\|62515029\|ref\|ZP_00386522.1\| COG0110: Acetyltransferase (isoleucine patch superfamily) [Lactobacil...	140.0	[0..6]	[175..37]

Back

Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHIFDELDN AYKQKEAYLL DHWNRSLPFQ DAMFDRWERA QRLGFGEDVS IYNSALVFGN  60
   61 VAVGANSWIG PYVILDGSGG RLSIGCYCSI SAGVYIYTHD SVAWAVTGGK SVYQKGDVTI 120
  121 GNCCYIAPQS IIKMGIKIGD HSIIGANSFV NTNVPAYSIV AGSPAKVIGK VEIINDKVNL 180
  181 KYY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.221849
Match:	2ic7A
Description:	No description for 2ic7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits