YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29541183, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	79 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29541183, gi|....

Description	E-value	Query Range	Subject Range
gi\|91708587, gi\|... - gi\|91774600\|ref\|YP_544356.1\| BolA-like protein [Methylobacillus flagellatus KT], gi\|91708587\|gb\|ABE4...	106.0	[0..1]	[78..1]
gi\|22294597, gi\|... - gi\|22298418\|ref\|NP_681665.1\| hypothetical protein tsl0875 [Thermosynechococcus elongatus BP-1], gi\|2...	105.0	[0..1]	[78..1]
gi\|74057405, gi\|... - gi\|74317910\|ref\|YP_315650.1\| hypothetical protein Tbd_1892 [Thiobacillus denitrificans ATCC 25259], ...	104.0	[0..1]	[77..11]
gi\|33574880 - gi\|33574880\|emb\|CAE39543.1\| BolA-like protein [Bordetella parapertussis] gi\|33598750 - gi\|33598750\|ref\|NP_886393.1\| BolA-like protein [Bordetella parapertussis 12822] gi\|33577949, gi\|... - gi\|33603824\|ref\|NP_891384.1\| BolA-like protein [Bordetella bronchiseptica RB50], gi\|33577949\|emb\|CAE... gi\|33564698, gi\|... - gi\|33594622\|ref\|NP_882266.1\| BolA-like protein [Bordetella pertussis Tohama I], gi\|33564698\|emb\|CAE4...	104.0	[0..3]	[78..6]
gi\|17429977 - gi\|17429977\|emb\|CAD16661.1\| probable transcription regulator protein [Ralstonia solanacearum GMI1000... gi\|17547673 - gi\|17547673\|ref\|NP_521075.1\| hypothetical protein RSc2954 [Ralstonia solanacearum GMI1000]	103.0	[0..3]	[76..4]
gi\|66572976, gi\|... - gi\|66767644\|ref\|YP_242406.1\| hypothetical protein XC_1317 [Xanthomonas campestris pv. campestris str... gi\|21113986, gi\|... - gi\|21232227\|ref\|NP_638144.1\| hypothetical protein XCC2796 [Xanthomonas campestris pv. campestris str...	103.0	[0..2]	[75..1]
gi\|83748213, gi\|... - gi\|83748213\|ref\|ZP_00945240.1\| BolA protein [Ralstonia solanacearum UW551], gi\|83725181\|gb\|EAP72332.... gi\|206595917, gi... - gi\|207744511\|ref\|YP_002260903.1\| hypothetical protein RSIPO_02721 [Ralstonia solanacearum IPO1609], ... gi\|206587000, gi... - gi\|207721833\|ref\|YP_002252271.1\| hypothetical protein RSMK02113 [Ralstonia solanacearum MolK2], gi\|2...	103.0	[0..3]	[76..4]
gi\|78037098, gi\|... - gi\|78048668\|ref\|YP_364843.1\| transcription regulator BolA [Xanthomonas campestris pv. vesicatoria st...	103.0	[0..2]	[75..11]
gi\|254253454, gi... - gi\|84360612\|ref\|ZP_00985310.1\| COG5007: Predicted transcriptional regulator, BolA superfamily [Burkh... gi\|189351722, gi... - gi\|189351722\|ref\|YP_001947350.1\| BolA superfamily transcriptional regulator [Burkholderia multivoran... gi\|167587700 - gi\|167587700\|ref\|ZP_02380088.1\| BolA family protein [Burkholderia ubonensis Bu] gi\|221172870, gi... - gi\|221207282\|ref\|ZP_03580292.1\| BolA/YrbA family protein [Burkholderia multivorans CGD2], gi\|2211728... gi\|221201643, gi... - gi\|221201643\|ref\|ZP_03574681.1\| BolA/YrbA family protein [Burkholderia multivorans CGD2M], gi\|221178...	102.0	[0..3]	[77..4]
gi\|71485078, gi\|... - gi\|71549710\|ref\|ZP_00669901.1\| BolA-like protein [Nitrosomonas eutropha C71], gi\|71485078\|gb\|EAO1763...	102.0	[0..1]	[77..1]

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Predicted Domain #1

Region A:
Residues: [1-79]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTTHDIKQW IETGLSESRV ISAEGDGHHF EAVVLCPTFE GQTALTRHRL VYNALGSHMQ  60
   61 SDIHALSLKT YTPDEYERG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.39794
Match:	1xs3A
Description:	Solution Structure Analysis of the XC975 protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits