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View Structure Prediction Details

Protein: HGNC:23354|MIM:6...
Organism: SPECIES UNKNOWN
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:23354|MIM:6....

Description E-value Query
Range
Subject
Range
gi|45934746, gi|... - gi|45934746|gb|AAS79427.1| cyclin Y [Homo sapiens], gi|15788437|gb|AAL07802.1|AF413522_1 cyclin-box ...
7.0E-83 [1..341] [1..341]
CCNY_MOUSE - Cyclin-Y OS=Mus musculus GN=Ccny PE=1 SV=1
3.0E-82 [1..341] [1..341]
gi|62663696, gi|... - gi|62663696|ref|XP_341546.2| PREDICTED: similar to cyclin fold protein 1 [Rattus norvegicus], gi|109...
4.0E-82 [1..341] [1..341]
gi|76632152 - gi|76632152|ref|XP_870071.1| PREDICTED: similar to cyclin fold protein 1 isoform 2 [Bos taurus]
1.0E-80 [1..341] [1..341]
gi|74005648 - gi|74005648|ref|XP_545613.2| PREDICTED: similar to cyclin fold protein 1 [Canis familiaris]
3.0E-72 [1..341] [1..363]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTTSCCVS SSPKLRRNAH SRLESYRPDT DLSREDTGCN LQHISDRENI DDLNMEFNPS  60
   61 DHPRASTIFL SKSQTDVREK RKSLFINHHP PGQIARKYSS CSTIFLDDST V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQPNLKYTIK CVALAIYYHI KNRDPDGRML LDIFDENLHP LSKSEVPPDY DKHNPEQKQI  60
   61 YRFVRTLFSA AQLTAECAIV TLVYLERLLT YAEIDICPAN WKRIVLGAIL LASKVWDDQA 120
  121 VWNVDYCQIL KDITVEDMNE LERQFLELLQ FNINVPSSVY AKYYFDLRSL AEANNLSFPL 180
  181 EPLSRERAHK LEAISRLCED KYKDLRRSAR KRSASADNLT LPRWSPAIIS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 2g9xB
Description: No description for 2g9xB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle