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View Structure Prediction Details

Protein: HGNC:6204|MIM:16...
Organism: SPECIES UNKNOWN
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:6204|MIM:16....

Description E-value Query
Range
Subject
Range
JUN_PIG - Transcription factor AP-1 OS=Sus scrofa GN=JUN PE=2 SV=1
2.0E-53 [1..331] [1..331]
gi|61366588, gi|... - gi|61366588|gb|AAX42879.1| v-jun sarcoma virus 17 oncogene-like [synthetic construct], gi|60653275|g...
8.0E-53 [1..331] [1..331]
gi|60821234 - gi|60821234|gb|AAX36566.1| v-jun sarcoma virus 17 oncogene-like [synthetic construct]
gi|49456409 - gi|49456409|emb|CAG46525.1| JUN [Homo sapiens]
2.0E-52 [1..331] [1..331]
gi|226129 - gi|226129|prf||1411298A c-jun gene
2.0E-52 [1..331] [1..331]
gi|109005078, gi... - gi|109005078|ref|XP_001114681.1| PREDICTED: similar to Transcription factor AP-1 (Activator protein ...
6.0E-52 [1..331] [1..334]
JUN_RAT - Transcription factor AP-1 OS=Rattus norvegicus GN=Jun PE=1 SV=1
gi|57820 - gi|57820|emb|CAA35041.1| unnamed protein product [Rattus sp.]
1.0E-51 [1..331] [1..334]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAKMETTFY DDALNASFLP SESGPYGYSN PKILKQSMTL NLADPVGSLK PHLRAKNSDL  60
   61 LTSPDVGLLK LASPELERLI IQSSNGHITT TPTPTQFLCP KNVTDEQEGF AEGFVRALAE 120
  121 LHSQNTLPSV TSAAQPVNGA GMVAPAVASV AGGSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGFSASLHS EPPVYANLSN FNPGALSSGG GAPSYGAAGL AFPAQPQQQQ QPPHHLPQQM  60
   61 PVQHPRLQAL KEEPQTVPEM PGETPPLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [244-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIDMESQERI KAERKRMRNR IAASKCRKRK LERIARLEEK VKTLKAQNSE LASTANMLRE  60
   61 QVAQLKQKVM NHVNSGCQLM LTQQLQTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.39794
Match: 1fosF
Description: C-jun
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle