YRC Public Data Repository - Protein Structure Prediction

Protein:	CYSA2_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	354 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYSA2_SHEON.

Description	E-value	Query Range	Subject Range
CYSA_BACCR - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 /... gi\|228656892, gi... - gi\|229126503\|ref\|ZP_04255517.1\| Sulphate transport system permease protein 1 [Bacillus cereus BDRD-C...	405.0	[0..1]	[352..1]
CYSA_BACC1 - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 10987 / NRS 248)...	404.0	[0..1]	[352..1]
gi\|89205648, gi\|... - gi\|89205648\|ref\|ZP_01184216.1\| Sulphate transport system permease protein 1 [Bacillus weihenstephane...	400.0	[0..1]	[352..1]
gi\|110339573, gi... - gi\|110598816\|ref\|ZP_01387074.1\| Sulphate transport system permease protein 1 [Chlorobium ferrooxidan...	397.0	[0..1]	[352..1]
gi\|82721006, gi\|... - gi\|82741615\|ref\|ZP_00904332.1\| Sulphate transport system permease protein 1 [Shewanella sp. W3-18-1]... gi\|145563525, gi... - gi\|77815460\|ref\|ZP_00814690.1\| ABC transporter [Shewanella putrefaciens CN-32], gi\|77809565\|gb\|EAO93...	396.0	[0..1]	[354..1]
gi\|18894174, gi\|... - gi\|18978342\|ref\|NP_579699.1\| putative multiple sugar-binding transport ATP-binding protein [Pyrococc...	395.0	[0..1]	[352..11]
gi\|89335149, gi\|... - gi\|89895701\|ref\|YP_519188.1\| hypothetical protein DSY2955 [Desulfitobacterium hafniense Y51], gi\|893...	395.0	[0..1]	[352..84]
gi\|221564040, gi... - gi\|222054751\|ref\|YP_002537113.1\| sulfate ABC transporter, ATPase subunit [Geobacter sp. FRC-32], gi\|...	394.0	[0..1]	[352..1]
gi\|146399407, gi... - gi\|88937959\|ref\|ZP_01143484.1\| Sulphate transport system permease protein 1 [Geobacter uraniumreduce...	394.0	[0..1]	[352..1]
gi\|91774964, gi\|... - gi\|91774964\|ref\|YP_544720.1\| sulphate transport system permease protein 1 [Methylobacillus flagellat...	393.0	[0..1]	[350..1]

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Predicted Domain #1

Region A:
Residues: [1-354]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIHIQQVNK HFGNFVAVDS VNLEIKTGEL TALLGPSGSG KTTLLRIIAG LEQADSGIVK  60
   61 FNGEDITTQH VSERGVGFVF QHYALFKHMT VFENVAYGLT VRPRKTRPSK AEIAEKVHSL 120
  121 LKLVQLDWTA DRYPSQLSGG QRQRIALARA LAVEPKVLLL DEPFGALDAK VRAELRRWLR 180
  181 RLHDEINVTT VFVTHDQEEA LEVADKIVVM NKGRIEQQGT PEEVYDTPSN PFVYEFLGNV 240
  241 NLFHARVKHG HSTIGNIHIP SPEHAGGEEQ QGLAYVRPHE IEVLTQPTEN AIKVNLDLVT 300
  301 IVGPVARLEV LTEIDEQLIH VELSKVQFKQ LGISKGDNAW IQPRYSKVFL GEGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	109.0
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits