YRC Public Data Repository - Protein Structure Prediction

Protein:	CYSA1_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	376 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYSA1_SHEON.

Description	E-value	Query Range	Subject Range
gi\|78690922, gi\|... - gi\|78690922\|ref\|ZP_00855557.1\| Sulphate transport system permease protein 1 [Shewanella sp. MR-7], g...	404.0	[0..1]	[376..1]
gi\|78505044, gi\|... - gi\|78687199\|ref\|ZP_00851953.1\| Sulphate transport system permease protein 1 [Shewanella sp. ANA-3], ...	403.0	[0..1]	[376..1]
gi\|124507875, gi... - gi\|124549466\|ref\|ZP_01707684.1\| sulfate ABC transporter, ATPase subunit [Shewanella putrefaciens 200... gi\|82742666, gi\|... - gi\|82742666\|ref\|ZP_00905350.1\| Sulphate transport system permease protein 1 [Shewanella sp. W3-18-1]... gi\|77816594, gi\|... - gi\|77816594\|ref\|ZP_00815770.1\| ABC transporter [Shewanella putrefaciens CN-32], gi\|77808449\|gb\|EAO92...	402.0	[0..1]	[376..1]
gi\|68518341, gi\|... - gi\|68543967\|ref\|ZP_00583649.1\| ABC transporter [Shewanella baltica OS155], gi\|68518341\|gb\|EAN41920.1... gi\|113950349, gi... - gi\|160874216\|ref\|YP_001553532.1\| sulfate ABC transporter, ATPase subunit [Shewanella baltica OS195],...	402.0	[0..1]	[376..1]
gi\|82498281, gi\|... - gi\|82498281\|ref\|ZP_00883787.1\| Sulphate transport system permease protein 1 [Shewanella sp. MR-4], g...	401.0	[0..1]	[376..1]
gi\|227080724, gi... - gi\|227080724\|ref\|YP_002809275.1\| sulfate ABC transporter, ATP-binding protein [Vibrio cholerae M66-2... gi\|229355898, gi... - gi\|229507153\|ref\|ZP_04396659.1\| sulfate and thiosulfate import ATP-binding protein CysA [Vibrio chol... gi\|229519652, gi... - gi\|229519652\|ref\|ZP_04409095.1\| sulfate and thiosulfate import ATP-binding protein CysA [Vibrio chol... CYSA_VIBCH - Sulfate/thiosulfate import ATP-binding protein CysA OS=Vibrio cholerae GN=cysA PE=3 SV=1 gi\|153223829, gi... - gi\|153223829\|ref\|ZP_01954084.1\| sulfate ABC transporter, ATP-binding protein [Vibrio cholerae MAK 75... gi\|229368824, gi... - gi\|229606169\|ref\|YP_002876817.1\| sulfate and thiosulfate import ATP-binding protein CysA [Vibrio cho... gi\|153819117, gi... - gi\|153819117\|ref\|ZP_01971784.1\| sulfate ABC transporter, ATP-binding protein [Vibrio cholerae NCTC 8... gi\|126518549, gi... - gi\|229508985\|ref\|ZP_04398473.1\| sulfate and thiosulfate import ATP-binding protein CysA [Vibrio chol... CYSA_VIBCH - Sulfate/thiosulfate import ATP-binding protein CysA OS=Vibrio cholerae serotype O1 (strain ATCC 3931... gi\|75829236, gi\|... - gi\|75829236\|ref\|ZP_00758546.1\| COG1118: ABC-type sulfate/molybdate transport systems, ATPase compone...	395.0	[0..1]	[376..1]
gi\|153829921, gi... - gi\|153829921\|ref\|ZP_01982588.1\| sulfate ABC transporter, ATP-binding protein [Vibrio cholerae 623-39... tr\|A0A085TAP3\|A0... - Sulfate/thiosulfate import ATP-binding protein CysA OS=Vibrio cholerae GN=cysA PE=3 SV=1, Sulfate/th... gi\|116216933, gi... - gi\|75823712\|ref\|ZP_00753196.1\| COG1118: ABC-type sulfate/molybdate transport systems, ATPase compone... gi\|116219815, gi... - gi\|75819261\|ref\|ZP_00749350.1\| COG1118: ABC-type sulfate/molybdate transport systems, ATPase compone...	394.0	[0..1]	[376..1]
gi\|147674663, gi... - gi\|75825912\|ref\|ZP_00755347.1\| COG1118: ABC-type sulfate/molybdate transport systems, ATPase compone...	394.0	[0..1]	[376..1]
gi\|121629167, gi... - gi\|75815688\|ref\|ZP_00746185.1\| COG1118: ABC-type sulfate/molybdate transport systems, ATPase compone...	393.0	[0..1]	[376..1]
CYSA_BACCR - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 /... gi\|228656892, gi... - gi\|229126503\|ref\|ZP_04255517.1\| Sulphate transport system permease protein 1 [Bacillus cereus BDRD-C...	384.0	[0..1]	[354..1]

Back

Predicted Domain #1

Region A:
Residues: [1-376]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRLTNISK KFGQFQALSP LNLDIQEGEM IGLLGPSGSG KTTLLRIIAG LEGADSGHIH  60
   61 FGNRDVTQVH VRDRRVGFVF QNYALFRHMT VADNVAFGLE VIPKKQRPSA AEIQKRVSHL 120
  121 LEMVQLGHLA QRYPEQLSGG QKQRIALARA LATQPEVLLL DEPFGALDAK VRKELRRWLR 180
  181 SLHDELKFTS VFVTHDQDEA LELSDRVVVM SNGNIEQVNT PIELYAQPNS RFVFDFLGNV 240
  241 NRFEANWQQN RWTNGDAFIV PPEQTPLQQN GALYVRSHEL ALADKPNSQA HIPFTIVAIT 300
  301 PIGAEVRVEL APIGWQSEEL WEAKFTHHHL QELGLQKGSV VYATPRTGYF FGKQGDGSPI 360
  361 RQSWPFLPPG SLAFDI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	105.0
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits