YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|24374748, gi|...
Organism: Shewanella oneidensis MR-1
Length: 119 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24374748, gi|....

Description E-value Query
Range
Subject
Range
gi|63257401, gi|... - gi|66046694|ref|YP_236535.1| flagellar protein FlaG protein [Pseudomonas syringae pv. syringae B728a...
109.0 [0..1] [119..14]

Back

Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVSNRVDLA QVPLKAPTAD VELKRNAAVS AVEQSTEQSG TENEQNPGKL TQVATELSDM  60
   61 MSMMRKGLAF KVDENSGQAV VTVLDRDTGD VIRQMPSEEA LKLAEKLSEV TGLLMKTEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 2hc5A
Description: No description for 2hc5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle