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View Structure Prediction Details

Protein: gi|24374408, gi|...
Organism: Shewanella oneidensis MR-1
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24374408, gi|....

Description E-value Query
Range
Subject
Range
gi|13625941, gi|... - gi|162464404|ref|NP_001105050.1| sulfate transporter ST1 [Zea mays], gi|13625941|gb|AAK35215.1|AF355...
214.0 [0..2] [391..94]
gi|13487715 - gi|13487715|gb|AAK27687.1| sulfate transporter 1 [Lycopersicon esculentum]
209.0 [0..2] [391..95]
gi|115451317, gi... - gi|50920451|ref|XP_470586.1| Putative sulfate transporter [Oryza sativa (japonica cultivar-group)], ...
208.0 [0..2] [391..98]
gi|125542756, gi... - gi|20162449|gb|AAM14590.1|AF493792_1 putative sulphate transporter [Oryza sativa], gi|20162445|gb|AA...
208.0 [0..2] [391..98]
gi|24421087 - gi|24421087|emb|CAD55701.1| sulphate transporter [Triticum aestivum]
208.0 [0..2] [391..98]
gi|24421075 - gi|24421075|emb|CAD55695.1| sulphate transporter [Aegilops speltoides]
206.0 [0..3] [391..99]
gi|4850271 - gi|4850271|emb|CAB42985.1| putative high affinity sulfate transporter [Aegilops tauschii]
206.0 [0..3] [391..99]
gi|28300414, gi|... - gi|28300414|gb|AAO34714.1| high-affinity sulfate transporter HvST1 [Hordeum vulgare subsp. vulgare],...
205.0 [0..2] [391..96]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLAIPLQG AQMLFVAFGA LVLMPLLTGL DTSVALFTAG IGTLLFQLIT KRQVPIFLAS  60
   61 SFAFIAPILY GVQTWGIPST MGGIMAAGVV YVCLGALVKV RGTDFIHKLL PPVVVGPVII 120
  121 IIGLGLAPVA VNMALGKSGD GSLALVPTNT ALIISLVSLC 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTIAVAIFAK GLLKVMPILA GIIVGYGLSL AFGIVDFSVV TAANWIAIPK FVAPEFNWHA  60
   61 IAFMIPVAIA PAVEHIGDIL AISNVTGKDF MKKPGLHRTL TGDGVATIAA AAFGGPPNTT 120
  121 YSEVTGAVTL TRNFDPRIMT WTAITAITLA FVGKLGALMQ TIPVPVMGGI MCLLFGSIAA 180
  181 VGLNTLIRNH VDLSEPRNLS IVGVTLVFGI GGMAFGIGSF SLTGISLCGI VAITMNLLLP 240
  241 ASKHHKQDVA SH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle