YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24373330, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	225 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24373330, gi|....

Description	E-value	Query Range	Subject Range
gi\|46119786, gi\|... - gi\|67922552\|ref\|ZP_00516060.1\| Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferas...	157.0	[0..2]	[223..13]
gi\|82741586, gi\|... - gi\|82741586\|ref\|ZP_00904304.1\| streptogramin A acetyl transferase [Shewanella sp. W3-18-1], gi\|82721...	155.0	[0..1]	[217..1]
gi\|160874717, gi... - gi\|160874717\|ref\|YP_001554033.1\| hexapaptide repeat-containing transferase [Shewanella baltica OS195...	154.0	[0..2]	[217..4]
gi\|77812107, gi\|... - gi\|77812874\|ref\|ZP_00812157.1\| transferase hexapeptide repeat [Shewanella putrefaciens CN-32], gi\|77...	154.0	[0..1]	[217..1]
gi\|7542375, gi\|2... - gi\|7542375\|gb\|AAF63432.1\|AF170730_1 streptogramin A acetyl transferase [Yersinia enterocolitica], gi...	154.0	[0..9]	[223..6]
gi\|78511182, gi\|... - gi\|78689445\|ref\|ZP_00854107.1\| streptogramin A acetyl transferase [Shewanella sp. MR-7], gi\|78511182...	153.0	[0..1]	[225..1]
gi\|68521686, gi\|... - gi\|68540467\|ref\|ZP_00580218.1\| transferase hexapeptide repeat [Shewanella baltica OS155], gi\|6852168...	152.0	[0..1]	[217..1]
gi\|82411382, gi\|... - gi\|82703317\|ref\|YP_412883.1\| acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase ...	152.0	[0..3]	[221..5]
gi\|86606605 - gi\|86606605\|ref\|YP_475368.1\| acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase ... gi\|86555147, gi\|... - gi\|86606605\|ref\|YP_475368.1\| UDP-N-acetylglucosamine acyltransferase [Synechococcus sp. JA-3-3Ab], g...	152.0	[0..4]	[224..17]
gi\|187478240, gi... - gi\|187478240\|ref\|YP_786264.1\| acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferas...	152.0	[0..3]	[223..4]

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Predicted Domain #1

Region A:
Residues: [1-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSHDHLQL GPNPNDKAPL KGFPQVGFVK NFITRNNIIV GDYTYYDDPA GPERFESNVL  60
   61 YHFDFVGDKL IIGKFCAIAK NVKFIMNGAN HSVSGFSTYP FYIFGNGWEK ATPKPEDLPF 120
  121 KGDTRIGHDV WIGYNATIMP GVNIGHGAII ASQSVVTKDV PPYAVVGGNP ATIIKLRFEQ 180
  181 TVIDELLAIA WWDWPIEKIT EHLHAIVSAD LSQLARLADG IHTQP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.69897
Match:	1khrA
Description:	Xenobiotic acetyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.83213120696425	bayes_pls_golite062009
O-acyltransferase activity	1.71880487653974	bayes_pls_golite062009
O-acetyltransferase activity	1.31478733177395	bayes_pls_golite062009
transferase activity	0.819584274944333	bayes_pls_golite062009
acetyltransferase activity	0.80907457868323	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: