YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24346814, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	162 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24346814, gi|....

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	135.0	[0..12]	[156..3]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	134.0	[0..9]	[160..1]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	133.0	[0..12]	[156..2]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	133.0	[0..13]	[158..3]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	131.0	[0..13]	[161..20]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	129.0	[0..13]	[161..20]
gi\|255515613 - gi\|255515613\|ref\|ZP_05383289.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|255648707 - gi\|255648707\|ref\|ZP_05395609.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|145956070, gi... - gi\|90576237\|ref\|ZP_01232702.1\| hypothetical protein CdifQ_02000170 [Clostridium difficile QCD-32g58]... gi\|254973810 - gi\|254973810\|ref\|ZP_05270282.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|255091197 - gi\|255091197\|ref\|ZP_05320675.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|255312854 - gi\|255312854\|ref\|ZP_05354437.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di...	128.0	[0..3]	[160..2]
gi\|58425029 - gi\|58425029\|gb\|AAW74066.1\| ribosomal-protein-alanine acetyltransferase [Xanthomonas oryzae pv. oryza...	128.0	[0..15]	[158..158]
gi\|78044332, gi\|... - gi\|78044332\|ref\|YP_359578.1\| ribosomal-protein-alanine acetyltransferase [Carboxydothermus hydrogeno...	128.0	[0..18]	[160..1]
gi\|25330061 - pir\|\|E97249 probable acetyltransferase [imported] - Clostridium acetobutylicum gi\|15025884, gi\|... - gi\|15896095\|ref\|NP_349444.1\| acetyltransferase [Clostridium acetobutylicum ATCC 824], gi\|15025884\|gb...	127.0	[0..11]	[156..2]

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Predicted Domain #1

Region A:
Residues: [1-162]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYQIIKKLN ESLQIVLLDP SDVDQMAQIE ASAHSHPMSL NNLADCFGHL YRVFGLTHTS  60
   61 GQLFGFAIIQ QIVDEVTLLD ICLVPAEQGQ GFGRLLLDAI IEDAKNAGAV VVMLEVRESN 120
  121 LAARALYQNR GFVETGRRKG YYLLAEGKED AILMDLALSE TA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.045757
Match:	2cnmA
Description:	No description for 2cnmA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits