YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24345934, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	135 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24345934, gi|....

Description	E-value	Query Range	Subject Range
gi\|78504870, gi\|... - gi\|78687370\|ref\|ZP_00852120.1\| MutT/nudix family protein [Shewanella sp. ANA-3], gi\|78504870\|gb\|EAP1...	107.0	[0..1]	[135..1]
gi\|75701836, gi\|... - gi\|75908111\|ref\|YP_322407.1\| Mutator MutT [Anabaena variabilis ATCC 29413], gi\|75701836\|gb\|ABA21512....	106.0	[0..2]	[129..4]
gi\|113883495, gi... - gi\|82496851\|ref\|ZP_00882414.1\| MutT/nudix family protein [Shewanella sp. MR-4], gi\|82405125\|gb\|EAP45...	105.0	[0..1]	[135..1]
gi\|113890491, gi... - gi\|78688530\|ref\|ZP_00853198.1\| MutT/nudix family protein [Shewanella sp. MR-7], gi\|78511911\|gb\|EAP25...	105.0	[0..1]	[135..1]
gi\|95134962, gi\|... - gi\|95929061\|ref\|ZP_01311806.1\| NUDIX hydrolase [Desulfuromonas acetoxidans DSM 684], gi\|95134962\|gb\|...	104.0	[0..6]	[124..155]
gi\|113942320, gi... - gi\|113942320\|ref\|ZP_01428055.1\| NUDIX hydrolase [Herpetosiphon aurantiacus ATCC 23779], gi\|113896038...	103.0	[0..2]	[135..6]
gi\|241879417, gi... - gi\|241908245\|ref\|ZP_04792816.1\| NUDIX hydrolase [Desulfovibrio vulgaris RCH1], gi\|241879417\|gb\|EER78... gi\|120602045, gi... - gi\|120602045\|ref\|YP_966445.1\| NUDIX hydrolase [Desulfovibrio vulgaris subsp. vulgaris DP4], gi\|12056...	103.0	[0..3]	[130..16]
gi\|218903146, gi... - gi\|218903146\|ref\|YP_002450980.1\| mutT/nudix family protein [Bacillus cereus AH820], gi\|218538674\|gb\|... gi\|195990582, gi... - gi\|196036779\|ref\|ZP_03104169.1\| mutT/nudix family protein [Bacillus cereus W], gi\|195990582\|gb\|EDX54... gi\|49333329, gi\|... - gi\|49481773\|ref\|YP_036157.1\| MutT/Nudix family protein [Bacillus thuringiensis serovar konkukian str...	103.0	[0..11]	[129..22]
gi\|42781140, gi\|... - gi\|42781140\|ref\|NP_978387.1\| mutT/nudix family protein [Bacillus cereus ATCC 10987], gi\|42737061\|gb\|...	102.0	[0..11]	[129..98]
gi\|49178793, gi\|... - gi\|49184866\|ref\|YP_028118.1\| mutT/nudix family protein [Bacillus anthracis str. Sterne], gi\|49178793... gi\|47502442, gi\|... - gi\|47527294\|ref\|YP_018643.1\| mutT/nudix family protein [Bacillus anthracis str. 'Ames Ancestor'], gi... gi\|30256651, gi\|... - gi\|30262025\|ref\|NP_844402.1\| mutT/nudix family protein [Bacillus anthracis str. Ames], gi\|30256651\|g... gi\|227815180, gi... - gi\|227815180\|ref\|YP_002815189.1\| mutT/nudix family protein [Bacillus anthracis str. CDC 684], gi\|227... gi\|21399872, gi\|... - gi\|65319308\|ref\|ZP_00392267.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ... gi\|229602087, gi... - gi\|229602087\|ref\|YP_002866391.1\| MutT/NUDIX family protein [Bacillus anthracis str. A0248], gi\|22926... gi\|254684590 - gi\|254684590\|ref\|ZP_05148450.1\| mutT/nudix family protein [Bacillus anthracis str. CNEVA-9066] gi\|254721348 - gi\|254721348\|ref\|ZP_05183138.1\| mutT/nudix family protein [Bacillus anthracis str. A1055] gi\|254734896 - gi\|254734896\|ref\|ZP_05192608.1\| mutT/nudix family protein [Bacillus anthracis str. Western North Ame... gi\|254741295 - gi\|254741295\|ref\|ZP_05198983.1\| mutT/nudix family protein [Bacillus anthracis str. Kruger B] gi\|254750847 - gi\|254750847\|ref\|ZP_05202886.1\| mutT/nudix family protein [Bacillus anthracis str. Vollum] gi\|254760087 - gi\|254760087\|ref\|ZP_05212111.1\| mutT/nudix family protein [Bacillus anthracis str. Australia 94] gi\|167531854, gi... - gi\|167633042\|ref\|ZP_02391368.1\| mutT/nudix family protein [Bacillus anthracis str. A0442], gi\|167531... gi\|165870172, gi... - gi\|165870172\|ref\|ZP_02214828.1\| mutT/nudix family protein [Bacillus anthracis str. A0488], gi\|164714... gi\|170686357, gi... - gi\|170686357\|ref\|ZP_02877578.1\| mutT/nudix family protein [Bacillus anthracis str. A0465], gi\|170669... gi\|167513597, gi... - gi\|167638296\|ref\|ZP_02396573.1\| mutT/nudix family protein [Bacillus anthracis str. A0193], gi\|167513... gi\|177650916, gi... - gi\|177650916\|ref\|ZP_02933813.1\| mutT/nudix family protein [Bacillus anthracis str. A0174], gi\|172083... gi\|170128966, gi... - gi\|170705964\|ref\|ZP_02896426.1\| mutT/nudix family protein [Bacillus anthracis str. A0389], gi\|170128... gi\|190559709, gi... - gi\|190569208\|ref\|ZP_03022105.1\| mutT/nudix family protein [Bacillus anthracis Tsiankovskii-I], gi\|19...	102.0	[0..11]	[129..22]

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Predicted Domain #1

Region A:
Residues: [1-135]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEDRFRLS SHAVITNELG QVLLLKANYG NFAWGLPGGA LEPGETIHEA LLRECQEELG  60
   61 LEVNIHYLSG VYYHSAYQSQ AFIFRCEFAA ADAMIRLSHE HSEFAFHDID TLSAVQQQRI 120
  121 KDCLNFNGVV VSAKF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	18.221849
Match:	2pbtA
Description:	No description for 2pbtA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits