| Protein: | gi|24345706, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 684 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24345706, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [683..8] |
|
|
453.0 | [0..1] | [683..8] |
|
|
450.0 | [0..20] | [683..5] |
|
|
450.0 | [0..20] | [683..5] |
|
|
450.0 | [0..1] | [684..1] |
|
|
449.0 | [0..20] | [683..5] |
|
|
449.0 | [0..20] | [683..5] |
|
|
448.0 | [0..20] | [683..5] |
|
|
448.0 | [0..16] | [683..1] |
|
|
448.0 | [0..1] | [684..1] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MKSSAAIKIP LSFLTSGLVK SVIGIALLFG FLPSSFAENR LIDVKYHALV DHQLAVELVF 60
61 EDAISAPKID SNASPAELVL TFDNSISGLS KDRLPINQVG VKDIVTSQHD ARLKVTLGLS 120
121 KVKPYQGSVV GNSYRLTIND GVASSQASNN PFVNSVKNID FRRNSNGGGD LLVYLNNRSV 180
181 AANVEQIGAK LEVQLYNTDI NNDLLYVMDV QDFSTPVKNF ETFKDDLTAR ILVDVTGNY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [240-302] |
1 11 21 31 41 51
| | | | | |
1 EFNFKQEDNL FILSINKVER VVATKDIKKY NGKTLSLNFQ NISVRTVLQI IADYNNFNLV 60
61 TSD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.763 | d.68.3 | SirA-like |
| View | Download | 0.755 | d.68.3 | SirA-like |
| View | Download | 0.627 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.622 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.582 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.528 | d.68.3 | SirA-like |
| View | Download | 0.520 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.515 | d.68.3 | SirA-like |
| View | Download | 0.511 | d.68.3 | SirA-like |
|
Region A: Residues: [303-473] |
1 11 21 31 41 51
| | | | | |
1 SVEGDITLRL DDVPWDQALD LILQTKGLDK RIEGNILMVA PSEELAIRES QNLKNKQEVK 60
61 ELAPLYSEYL QINYAKATDI AELLKGADSS LLSPRGSVAV DERTNTVLVK DTAEIIENIH 120
121 RLVEVLDIPI RQVLIESRMV TVKDDVSEDL GIRWGVTDQQ GNKGTSGSLE G
|
| Detection Method: | |
| Confidence: | 17.013228 |
| Match: | PF03958.5 |
| Description: | No description for PF03958.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [474-565] |
1 11 21 31 41 51
| | | | | |
1 AGDIANGKVP SLDNRLNVNL PAAVTNPTSI AFHVAKLADG TILDLELSAL EQENKGEIIA 60
61 SPRITTSNQK AAYIEQGVEI PYVQSTSSGA TS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.799 | d.58.54 | Description not found. |
| View | Download | 0.742 | b.38.5 | Description not found. |
| View | Download | 0.695 | d.243.1 | Description not found. |
| View | Download | 0.693 | b.61.8 | Description not found. |
| View | Download | 0.646 | d.58.54 | Description not found. |
| View | Download | 0.548 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.520 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.502 | c.47.1 | Thioredoxin-like |
| View | Download | 0.496 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.482 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.476 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.423 | b.1.1 | Immunoglobulin |
| View | Download | 0.348 | d.214.1 | Hypothetical protein MTH1880 |
| View | Download | 0.299 | d.88.1 | SRF-like |
| View | Download | 0.256 | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [566-684] |
1 11 21 31 41 51
| | | | | |
1 VTFKKAVLSL RVTPQITPDN RVILDLEITQ DSQGKTVDTP TGPAVAIDTQ RIGTQVLVDN 60
61 GETIVLGGIY QQNLISRVSK VPILGDIPLV GFLFRNTTDK NERQELLIFV TPKIVNEKL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.401 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.399 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.376 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.350 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.320 | N/A | N/A | d.240.1 | Description not found. |
| View | Download | 0.302 | N/A | N/A | d.189.1 | PX domain |
| View | Download | 0.292 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.264 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.238 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.234 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
