Protein: | YSW1_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 609 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YSW1_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..609] | [1..609] |
|
0.001 | [202..506] | [314..633] |
Region A: Residues: [1-281] |
1 11 21 31 41 51 | | | | | | 1 MSSLADTVEG SEAKRGRFSN NALTSDTGIL QKNSTLRNWF LKPTADLKNS CEDRVEDDVN 60 61 DVYLNDKNSQ KSVEERKLGR KVRSFFKQTN SNKDESVLED EDDALVWKKT SNKCAKKENS 120 121 HDIQKGSFTK KIRNSIFKSA NDVKEFRNEN NLLLPVELSS DDENESHFTD ANSHVMQSKS 180 181 PEKIPSKDQC LTKGAKNKGL KKEYEKSFEE YSDDSDDEFS PATPPENVLE GPYKFVFQTP 240 241 NTFTSQPNIT VENDFHKGGR HVIDYLNKKL ATMNIDIDLT S |
Detection Method: | |
Confidence: | 7.7 |
Match: | 1iu4A |
Description: | Microbial transglutaminase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [282-609] |
1 11 21 31 41 51 | | | | | | 1 GGKQNVSWEE ELDQLSDHVI ESITNHISKG RMHAQEKQDE LEKLKLENLN LSTLKQENLQ 60 61 HKQEINSLKD NLESISKKNN DLILEMNKLK KKSTNNKTNE YISTDENENE EITKSNMGPG 120 121 ILELNVNETS KKLQQSTFKP SKYLPRETRN NENRLKHLEK RIFGLEKSLE KKKKQVRADS 180 181 VRLDLNRYTI DQFLTLLKSL SEVLQFHNVY GNDLKENDDN IIKIETCCSA LNMKNCFEDS 240 241 SFRLQENSFK RQLGPLFANI NFSLIDQLTM NFRFYERSAN FQKETIGGLR MMLQDKDNYI 300 301 KTLMQHLKKK ESTKLIKDSK NGASTLTS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.