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View Structure Prediction Details

Protein: YRB30_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YRB30_YEAST.

Description E-value Query
Range
Subject
Range
YRB30 - RanGTP-binding protein, inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares s...
YRB30_YEAST - Ran-specific GTPase-activating protein 30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
gi|207345465 - gi|207345465|gb|EDZ72282.1| YGL164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
0.0 [1..440] [1..440]
YA4A_SCHPO - Uncharacterized protein C31A2.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC31A2....
SPAC31A2.10 - RanGTP-binding protein
0.0 [1..412] [1..458]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [1..412] [1..469]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEILAKAGS QAVTFAIKSG ISIASTYALK TITNFVVQIP KDDARRIDQL KFKLESRMAI  60
   61 VSSAIDLIKL VAARGNTNLQ ITLRLTKDLK EEIDRFDEKI NEMTQKVEGS RSAKTQNEAI 120
  121 KAVENYIKDL LLRIEEITPF INLSLTTSGA NLNSALPYQL SPGLLLKASD FVSENNRKYE 180
  181 KAMKSNEKGT GDKEILKVQV GPTFEVTLFS IFYNLT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [217-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SENNGQSGIV WKEDMKRAKA RIYRLNSTGR KYDYFMKIEQ DFNDGRYHED DDKEDTPQEL  60
   61 AIDLNHIKKL FFSVSGKLLR LEEQDSPVLV LKIDRSDDKE NESSEGDKGL LDDITWYAVS 120
  121 GYEAIEEDEE EDEEEDEEEG KDGEERKEEE EEENKLEDKD SSITLLEYII RLTSLQSNDQ 180
  181 KSILEVSDER LSIYLNDENT NSRKDRISNS TIEETEKKLK NLKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle