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View Structure Prediction Details

Protein: URA7_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 579 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for URA7_YEAST.

Description E-value Query
Range
Subject
Range
URA7_YEAST - CTP synthase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=URA7 PE=1 SV=2
gi|190408865 - gi|190408865|gb|EDV12130.1| CTP synthase 1 [Saccharomyces cerevisiae RM11-1a]
URA7 - Major CTP synthase isozyme (see also URA8), catalyzes the ATP-dependent transfer of the amide nitrog...
0.0 [1..579] [1..579]
PYRG1_MOUSE - CTP synthase 1 OS=Mus musculus GN=Ctps1 PE=1 SV=2
0.0 [1..575] [1..566]
gi|15221525 - gi|15221525|ref|NP_174368.1| CTP synthase, putative / UTP--ammonia ligase, putative [Arabidopsis tha...
0.0 [1..573] [1..563]
gi|14495609 - gi|14495609|gb|AAH09408.1| CTP synthase [Homo sapiens]
0.0 [1..575] [1..566]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVVVSGGV ISGIGKGVLA SSTGMLMKTL GLKVTSIKID PYMNIDAGTM SPLEHGECFV  60
   61 LDDGGETDLD LGNYERYLGV TLTKDHNITT GKIYSHVIAK ERKGDYLGKT VQIVPHLTNA 120
  121 IQDWIERVAK IPVDDTGMEP DVCIIELGGT VGDIESAPFV EALRQFQFKV GKENFALIHV 180
  181 SLVPVIHGEQ KTKPTQAAIK GLRSLGLV

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.57
Match: 1cp2A
Description: Nitrogenase iron protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [209-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDMIACRCSE TLDKPTIDKI AMFCHVGPEQ VVNVHDVNST YHVPLLLLEQ KMIDYLHARL  60
   61 KLDEISLTEE EKQRGLELLS KWKATTGNFD ESMETVKIAL VGKYTNLKDS YLSVIKALEH 120
  121 SSMKCRRKLD IKWVEATDLE PEAQESNKTK FHEAWNMVST ADGILIPGGF GVRGTEGMVL 180
  181 AARWARENHI PFLGVCLGLQ IATIEFTRSV LGRKDSHSAE FYPDIDEKNH VVVFMPEIDK 240
  241 ETMGGSMRLG LRPTFFQNET EWSQIKKLYG DVSEVHERHR HRYEINPKMV DELENNGLIF 300
  301 VGKDDTGKRC EILELKNHPY YIATQYHPEY TSKVLDPSKP FLGLVAASAG ILQDVIEGKY 360
  361 DLEAGENKFN F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1bxrB_
Description: Carbamoyl phosphate synthetase, small subunit N-terminal domain; Carbamoyl phosphate synthetase, small subunit C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle