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View Structure Prediction Details

Protein: SBE2_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 864 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBE2_YEAST.

Description E-value Query
Range
Subject
Range
gi|773192 - gi|773192|dbj|BAA08788.1| SBE2 [Saccharomyces cerevisiae]
0.0 [41..864] [1..824]
YAE3_SCHPO - TBC domain-containing protein C23D3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SP...
SPAC23D3.03c - GTPase activating protein
0.002 [457..593] [77..227]

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Predicted Domain #1
Region A:
Residues: [1-864]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARRLINIV PNTSKLDPLK EEDSTHLKQN QPKKFSTKEL MLSEYTERKS CSLPLSKSRS  60
   61 GSSASSSTTG SNGKNIGTRR PSSNLDFNFA SQDVVKNVLG NNNPHVPTAK CIRPISDDSI 120
  121 GTSSTEIFSS SHSNTTSDSL CTSDISSEEG EIANSKMEDN CFFKSMREAD HRSNITPLKK 180
  181 SRPGSILQKT RTASSADKTI CSMSTITTCI PSRQNSVSTP KLSRTVGLPG SSNTTNSIAA 240
  241 SQTSFISEND SPLKHHCMST ATIQEPKLMP ITKTPYVHSN STSVILPYKT TQLTPSQRYR 300
  301 LRKEQNDQSL RKAIKMKEKF YEDQDVNLEL QEGDVDGSLI WNIPMASLST SSFLTLSKFN 360
  361 RKEMSLDSAR GDEEILIQEN NCEGKQHSSS ALCVDKTFHQ VHSTRKHTSN SSNTLKESCL 420
  421 DYKELPPTCI PGISPVSDSQ YIQDTMKNLS QIYLHSSEKI SKSILSGRSR SVQSLPLEFK 480
  481 EASSQGMEDL MLVSEDKLKA VSHFRPSWLP PKDFKERKLQ DKQIYKNIDL ASMEELQKNK 540
  541 ERDEKAKKNE QNKVKFQHLL DRGITRNSSL SELKKIIWET PLISKVRLQI YSQLLQSDNC 600
  601 LITKCFIESF EEVMQLLNKM DFPKDKEFEI RQLIEHDVQE KVFYKNGTDK QVVSDLMLLL 660
  661 QLKSISQQGL VTGDEMLFYH FLTDQSFGTL KETWEMVNLI QMTCFSEICK EKYDSRILNP 720
  721 RGIVAHLLRK DEFKNEFNGG CLNSNTWWNI LQRMDHKLFM WVMDVIIVHN GQNFANYPVK 780
  781 MEIFKDKVWE YYRSKKVIVN YKILVSLTVN VLLNYHFGYD NLKHLSDLDD KHFCIPLYTE 840
  841 DSIEEENLNN IFTKWWLHYY RKLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [281-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STSVILPYKT TQLTPSQRYR LRKEQNDQSL RKAIKMKEKF YEDQDVNLEL QEGDVDGSLI  60
   61 WNIPMASLST SSFLTLSKFN RKEMSLDSAR GDEEILIQEN NCEGKQHSSS ALCVDKTFHQ 120
  121 VHSTRKHTSN SSNTLKESCL DYKELPPTCI PGISPVSDSQ YIQDTMKNLS QIYLHSSEKI 180
  181 SKSILSGRSR SVQSLPLEFK EASS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [485-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGMEDLMLVS EDKLKAVSHF RPSWLPPKDF KERKLQDKQI YKNI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [529-864]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLASMEELQK NKERDEKAKK NEQNKVKFQH LLDRGITRNS SLSELKKIIW ETPLISKVRL  60
   61 QIYSQLLQSD NCLITKCFIE SFEEVMQLLN KMDFPKDKEF EIRQLIEHDV QEKVFYKNGT 120
  121 DKQVVSDLML LLQLKSISQQ GLVTGDEMLF YHFLTDQSFG TLKETWEMVN LIQMTCFSEI 180
  181 CKEKYDSRIL NPRGIVAHLL RKDEFKNEFN GGCLNSNTWW NILQRMDHKL FMWVMDVIIV 240
  241 HNGQNFANYP VKMEIFKDKV WEYYRSKKVI VNYKILVSLT VNVLLNYHFG YDNLKHLSDL 300
  301 DDKHFCIPLY TEDSIEEENL NNIFTKWWLH YYRKLR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.2
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle