Protein: | RMD5_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 421 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RMD5_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..421] | [1..421] |
|
0.0 | [8..417] | [15..383] |
|
0.0 | [8..417] | [26..394] |
|
2.0E-93 | [53..418] | [4..381] |
Region A: Residues: [1-72] |
1 11 21 31 41 51 | | | | | | 1 MSELLDSFET EFAKFYTDSN LEETNLQKCL DHTHEFKSQL KKLKAHLNKH IQESKPEVYN 60 61 KLSDKEKQKF KR |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [73-280] |
1 11 21 31 41 51 | | | | | | 1 KRELIIEKLS KSQRQWDHSV KKQIKYVSQQ SNRFNKSTLN KLKEFDIDSV YVNKLPKETM 60 61 ENVNEAIGYH ILRYSIDNMP LGNKNEAFQY LKDVYGITNK ESTEFIEMGQ IVHDLKKGDT 120 121 ESCLKWCSNE MESLSSNHTA LSSLKFDLYT LSAMQIVKHG NPVELYYQIT QNAPLDCFRH 180 181 REKELMQNVV PLLTKSLIGQ PIEDIDSK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [281-421] |
1 11 21 31 41 51 | | | | | | 1 VNKELKECTS LFIKEYCAAK HIFFDSPLFL IVLSGLISFQ FFIKYKTIRE LAHVDWTTKD 60 61 ELPFDVKLPD FLTHFHPIFI CPVLKEETTT ENPPYSLACH HIISKKALDR LSKNGTITFK 120 121 CPYCPVNTSM SSTKKVRFVM L |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.281 | 0.930 | cytosol | a.1.1 | Globin-like |
Region A: Residues: [316-421] |
1 11 21 31 41 51 | | | | | | 1 LISFQFFIKY KTIRELAHVD WTTKDELPFD VKLPDFLTHF HPIFICPVLK EETTTENPPY 60 61 SLACHHIISK KALDRLSKNG TITFKCPYCP VNTSMSSTKK VRFVML |
Detection Method: | |
Confidence: | 3.69897 |
Match: | 2ct2A |
Description: | Solution Structure of the RING domain of the Tripartite motif protein 32 |
Matching Structure (courtesy of the PDB): |