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View Structure Prediction Details

Protein: PPAB_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPAB_YEAST.

Description E-value Query
Range
Subject
Range
PHO11 - One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface b...
gi|151944201 - gi|151944201|gb|EDN62490.1| acid phosphatase [Saccharomyces cerevisiae YJM789]
PPAB_YEAST - Acid phosphatase PHO11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO11 PE=1 SV=1
0.0 [1..467] [1..467]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
0.0 [1..467] [1..467]
gi|5419899 - gi|5419899|emb|CAB46490.1| acid phosphatase [Kluyveromyces lactis]
0.0 [2..461] [1..463]

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Predicted Domain #1
Region A:
Residues: [1-44]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKSAVYSIL AASLVNAGTI PLGKLSDIDK IGTQTEIFPF LGGS

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [77-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERYPTVSKAK SIMTTWYKLS NYTGQFSGAL SFLNDDYEFF IRDTKNLEME TTLANSVNVL  60
   61 NPYTG

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [229-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KYDTKYLSGI AKRLNKENKG LNLTSSDANT FFAWCAYEIN ARGYSDICNI FTKDELVRFS  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 709.68867
Match: 1qfxA_
Description: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [45-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPYYSFPGDY GISRDLPESC EMKQVQMVGR HG

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [142-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EMNAKRHARD FLAQYGYMVE NQTSFAVFTS NSNRCHDTAQ YFIDGLGDKF NISLQTISEA  60
   61 ESAGANTLSA HHSCPAWDDD VNDDILK

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [289-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGQDLETYYQ TGPGYDVVRS VGANLFNASV KLLKESEVQD QKVWLSFTHD TDILNYLTTI  60
   61 GIIDDKNNLT AEHVPFMENT FHRSWYVPQG ARVYTEKFQC SNDTYVRYVI NDAVVPIETC 120
  121 STGPGFSCEI NDFYDYAEKR VAGTDFLKVC NVSSVSNSTE LTFFWDWNTK HYNDTLLKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 709.68867
Match: 1qfxA_
Description: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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