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View Structure Prediction Details

Protein: MST28_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MST28_YEAST.

Description E-value Query
Range
Subject
Range
MST28 - Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member...
MST28_YEAST - Multicopy suppressor of SEC21 protein 28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
2.0E-93 [1..234] [1..234]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPPESTDV KLDTLNEPSA HLIEKNVALP KDIFRSYLSY WIYEIARYTP VMILSLVIGV  60
   61 LVLLIIFFND NEACVFNSAI FAFTSLVGLL IILSDGNPKL VSRRNFRTEL LVDVITRKPA 120
  121 VEGKEWRIIT YNMNQYLFNH GQWHTPYYFY SDEDCYRYFL RLVEGVTPKK QTATSIGNSP 180
  181 VTAKPEDAIE SASPSSRLNY QNFLLKAAEI ERQAQENYWR RRHPNIDALL KKTE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.958607
Match: PF00674
Description: DUP family

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle