YRC Public Data Repository - Protein Structure Prediction

Protein:	FMP45_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	309 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FMP45_YEAST.

Description	E-value	Query Range	Subject Range
FMP45 - Integral membrane protein localized to mitochondria (untagged protein); required for sporulation and... FMP45_YEAST - SUR7 family protein FMP45 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP45 PE=1 SV=... gi\|190405213 - gi\|190405213\|gb\|EDV08480.1\| integral membrane protein [Saccharomyces cerevisiae RM11-1a]	0.0	[1..309]	[1..309]
gi\|3850139 - gi\|3850139\|emb\|CAA21940.1\| potential membrane protein [Candida albicans] SUR7_CANAL - Protein SUR7 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SUR7 PE=1 SV=1	1.0E-96	[4..292]	[2..268]

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Predicted Domain #1

Region A:
Residues: [1-309]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKRFVNLL VFLFLLGAGL LTFFLILSGG RESGTLKNFY WLQADTNGFN SAPSTTRWYN  60
   61 YNWCGYEDGQ LANCSSRAPA KPFSPRDNFG NSVNLPSSFR NNRDTYYYLS RVGWAMLLIS 120
  121 LFFIVLALVP GFLATFLPFK AVPVLYCVLS WLAFFFIILA ACLYTGCYVK ARKTFRNSGR 180
  181 SARLGPKNFA FIWTSVFLML VNAIWSTIFS ATHKAHSTYS DHDMYAQYES PSVDTGAQME 240
  241 KSTYNSGATD GAGPITAAPV VGQPQPTTTT TPAGNGKFFQ KLKTRKQVPS AELEPAGDGG 300
  301 LAGPVTVRD

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits