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View Structure Prediction Details

Protein: ERD2_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERD2_YEAST.

Description E-value Query
Range
Subject
Range
gi|73958020 - gi|73958020|ref|XP_850429.1| PREDICTED: similar to ER lumen protein retaining receptor 2 (KDEL recep...
ERD22_MOUSE - ER lumen protein-retaining receptor 2 OS=Mus musculus GN=Kdelr2 PE=1 SV=1
ERD22_BOVIN - ER lumen protein-retaining receptor 2 OS=Bos taurus GN=KDELR2 PE=2 SV=1
ERD22_RAT - ER lumen protein-retaining receptor 2 OS=Rattus norvegicus GN=Kdelr2 PE=2 SV=1
gi|53734577, gi|... - gb|AAH86053.1| Unknown (protein for MGC:98369) [Xenopus laevis], gb|AAH83938.1| Unknown (protein fo...
tr|G1SJ08|G1SJ08... - pep:novel scaffold:oryCun2:GL018931:94102:114335:1 gene:ENSOCUG00000003101 transcript:ENSOCUT0000000...
4.0E-69 [1..218] [1..211]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
7.0E-69 [1..218] [3..213]
ENSCJAT00000030125 - null
KDELR2 - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
ENSPTRT00000034950 - null
gi|109065922 - gi|109065922|ref|XP_001090796.1| PREDICTED: KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein ret...
gi|90078062 - gi|90078062|dbj|BAE88711.1| unnamed protein product [Macaca fascicularis]
gi|123999086, gi... - gi|123999086|gb|ABM87127.1| KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor ...
9.0E-69 [1..218] [1..211]
ERD2B_ARATH - ER lumen protein-retaining receptor B OS=Arabidopsis thaliana GN=ERD2B PE=1 SV=1
1.0E-67 [1..218] [1..214]
gi|195339823, gi... - gi|195339823|ref|XP_002036516.1| GM18383 [Drosophila sechellia], gi|194130396|gb|EDW52439.1| GM18383...
gi|220942630, gi... - gi|220952878|gb|ACL88982.1| KdelR-PA [synthetic construct], gi|220942630|gb|ACL83858.1| KdelR-PA [sy...
KdelR-PB, KdelR-... - The gene KDEL receptor is referred to in FlyBase by the symbol Dmel\KdelR (CG5183, FBgn0022268). It ...
1.0E-67 [1..218] [1..211]
gi|190408867 - gi|190408867|gb|EDV12132.1| HDEL receptor [Saccharomyces cerevisiae RM11-1a]
gi|151946353 - gi|151946353|gb|EDN64575.1| HDEL receptor [Saccharomyces cerevisiae YJM789]
ERD2_YEAST - ER lumen protein-retaining receptor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERD2...
ERD2 - HDEL receptor, an integral membrane protein that binds to the HDEL motif in proteins destined for re...
1.0E-66 [1..219] [1..219]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPFRILGDL SHLTSILILI HNIKTTRYIE GISFKTQTLY ALVFITRYLD LLTFHWVSLY  60
   61 NALMKIFFIV STAYIVVLLQ GSKRTNTIAY NEMLMHDTFK IQHLLIGSAL MSVFFHHKFT 120
  121 FLELAWSFSV WLESVAILPQ LYMLSKGGKT RSLTVHYIFA MGLYRALYIP NWIWRYSTED 180
  181 KKLDKIAFFA GLLQTLLYSD FFYIYYTKVI RGKGFKLPK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 156.638272
Match: PF00810
Description: ER lumen protein retaining receptor

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTFLELAWSF SVWLESVAIL PQLYMLSKGG KTRSLTVHYI FAMGLYRALY IPNWIWRYST  60
   61 EDKKLDKIAF FAGLLQTLLY SDFFYIYYTK VIRGKGFKLP K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle