| Protein: | END3_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for END3_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-55 | [1..349] | [1..349] |
|
|
5.0E-54 | [3..339] | [5..351] |
|
|
2.0E-53 | [2..348] | [121..526] |
|
|
4.0E-52 | [3..339] | [5..351] |
|
|
1.0E-51 | [3..345] | [5..353] |
|
|
2.0E-50 | [38..283] | [283..539] |
|
|
5.0E-50 | [43..313] | [11..294] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MPKLEQFEIK KYWQIFSGLK PIENKVNHDQ VLPILYNSKL DSSVLNKIWF LADIDDDDNL 60
61 DFEEFVICMR LIFDMVNKNI SSVPDELPDW LIPGSKVN
|
| Detection Method: |  |
| Confidence: | 128.156545 |
| Match: | 1eh2__ |
| Description: | Eps15 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [99-180] |
1 11 21 31 41 51
| | | | | |
1 LIKERKKRKQ IENADLPPKK EIKVDWYMSP DDLNQYEKIY NSCAKLTDGT ITFNELSTKL 60
61 STKFFNISKT DLNKVWSLIN PQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.414 | a.39.1 | EF-hand |
| View | Download | 0.374 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.514 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.514 | a.4.3 | ARID-like |
| View | Download | 0.407 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.371 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.346 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.342 | a.4.1 | Homeodomain-like |
| View | Download | 0.330 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.327 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.300 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.293 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.291 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.287 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.270 | a.105.1 | FIS-like |
| View | Download | 0.267 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.260 | a.3.1 | Cytochrome c |
| View | Download | 0.256 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.256 | a.60.8 | HRDC-like |
| View | Download | 0.242 | a.4.1 | Homeodomain-like |
| View | Download | 0.240 | a.3.1 | Cytochrome c |
| View | Download | 0.218 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.218 | a.118.1 | ARM repeat |
| View | Download | 0.216 | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.204 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [181-274] |
1 11 21 31 41 51
| | | | | |
1 NLPSIDRDPT FYFIHCLRQR NDLGAEIPAS LPNSLAEVCN KKQLSYDLRS SQPPTKRKEE 60
61 ANEVDNLRDN GQNSSSDSSG SNVLSNEDSI KQKY
|
| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1iq5A_ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [275-349] |
1 11 21 31 41 51
| | | | | |
1 ASLTDDQVAN MREQLEGLLN YKKSEKTQGG SKLSKRINIR SITDDLDNIE QQVEVLENYL 60
61 NNKRHELQAL QAEIN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.757 | 0.047 | protein binding, bridging | a.47.2 | t-snare proteins |
| View | Download | 0.924 | 0.038 | protein binding, bridging | a.2.7 | tRNA-binding arm |
| View | Download | 0.818 | 0.017 | protein binding, bridging | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.849 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.751 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.730 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.670 | N/A | N/A | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.603 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.572 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.560 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.540 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.528 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.523 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.522 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.511 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.491 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.468 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.461 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.460 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.431 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.430 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.413 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.413 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.407 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.399 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.388 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.388 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.380 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.376 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.375 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.374 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.373 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.364 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.329 | N/A | N/A | a.159.2 | FF domain |
| View | Download | 0.317 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.316 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.314 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.309 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.306 | N/A | N/A | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.300 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.299 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.293 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.291 | N/A | N/A | a.139.1 | Type I dockerin domain |
| View | Download | 0.290 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.281 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.280 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.276 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.274 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.274 | N/A | N/A | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.272 | N/A | N/A | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.268 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.267 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.263 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.260 | N/A | N/A | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.256 | N/A | N/A | f.30.1 | Photosystem I reaction center subunit X, PsaK |
| View | Download | 0.252 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.241 | N/A | N/A | d.104.1 | Class II aaRS and biotin synthetases |
| View | Download | 0.232 | N/A | N/A | f.16.1 | Gated mechanosensitive channel |
| View | Download | 0.222 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.222 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.214 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.214 | N/A | N/A | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.211 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.208 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.207 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.205 | N/A | N/A | d.57.1 | DNA damage-inducible protein DinI |
