YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23097524, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23097524, gi|....

Description	E-value	Query Range	Subject Range
gi\|218536916, gi... - gi\|218901261\|ref\|YP_002449095.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus AH820], gi\|... gi\|196027418, gi... - gi\|196041798\|ref\|ZP_03109088.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus NVH0597-99],... gi\|52145154, gi\|... - gi\|52145154\|ref\|YP_081671.1\| hypothetical protein BCZK0054 [Bacillus cereus E33L], gi\|51978623\|gb\|AA...	200.0	[0..1]	[196..1]
gi\|47569908, gi\|... - gi\|47569908\|ref\|ZP_00240575.1\| spore cortex biosynthesis protein [Bacillus cereus G9241], gi\|4755344...	199.0	[0..1]	[196..1]
gi\|167641551, gi... - gi\|167641551\|ref\|ZP_02399799.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. A019... gi\|254682314 - gi\|254682314\|ref\|ZP_05146175.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. CNEV... gi\|229269248, gi... - gi\|229604840\|ref\|YP_002864711.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. A02... gi\|254762398 - gi\|254762398\|ref\|ZP_05214240.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. Aust... gi\|254756342 - gi\|254756342\|ref\|ZP_05208371.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. Voll... gi\|254735461 - gi\|254735461\|ref\|ZP_05193169.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. West... gi\|254724200 - gi\|254724200\|ref\|ZP_05185985.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. A105... gi\|47525312, gi\|... - gi\|47525312\|ref\|YP_016661.1\| hypothetical protein GBAA0058 [Bacillus anthracis str. 'Ames Ancestor']... gi\|30253571, gi\|... - gi\|30260250\|ref\|NP_842627.1\| hypothetical protein BA0058 [Bacillus anthracis str. Ames], gi\|30253571... gi\|49332437, gi\|... - gi\|49480881\|ref\|YP_034412.1\| hypothetical protein BT9727_0054 [Bacillus thuringiensis serovar konkuk... gi\|49177020, gi\|... - gi\|49183093\|ref\|YP_026345.1\| hypothetical protein BAS0058 [Bacillus anthracis str. Sterne], gi\|49177... gi\|172080159, gi... - gi\|177655318\|ref\|ZP_02936847.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. A017... gi\|196036370, gi... - gi\|196036370\|ref\|ZP_03103767.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus W], gi\|19599... gi\|170688898, gi... - gi\|170688898\|ref\|ZP_02880100.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. A046... gi\|170127501, gi... - gi\|170707505\|ref\|ZP_02897958.1\| spore cortex biosynthesis protein YabQ [Bacillus anthracis str. A038...	199.0	[0..1]	[196..1]
gi\|42735053, gi\|... - gi\|42779138\|ref\|NP_976385.1\| hypothetical protein BCE_0057 [Bacillus cereus ATCC 10987], gi\|42735053... gi\|222093829, gi... - gi\|222093829\|ref\|YP_002527878.1\| spore cortex biosynthesis protein [Bacillus cereus Q1], gi\|22123787... gi\|206977938, gi... - gi\|206977938\|ref\|ZP_03238825.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus H3081.97], g...	199.0	[0..1]	[196..1]
gi\|163938067, gi... - gi\|89207188\|ref\|ZP_01185734.1\| probable membrane protein [Bacillus weihenstephanensis KBAB4], gi\|891...	196.0	[0..1]	[196..1]
gi\|29893870, gi\|... - gi\|30018330\|ref\|NP_829961.1\| spore cortex biosynthesis protein [Bacillus cereus ATCC 14579], gi\|2989...	187.0	[0..7]	[195..1]
gi\|221312193 - gi\|221312193\|ref\|ZP_03593998.1\| hypothetical protein BsubsN3_00310 [Bacillus subtilis subsp. subtili... YABQ_BACSU - Spore protein YabQ OS=Bacillus subtilis (strain 168) GN=yabQ PE=2 SV=1 gi\|221317126 - gi\|221317126\|ref\|ZP_03598420.1\| hypothetical protein BsubsJ_00310 [Bacillus subtilis subsp. subtilis... gi\|221321389 - gi\|221321389\|ref\|ZP_03602683.1\| hypothetical protein BsubsS_00310 [Bacillus subtilis subsp. subtilis... YABQ_BACSU - Spore protein yabQ OS=Bacillus subtilis GN=yabQ PE=2 SV=1	183.0	[0..1]	[179..1]
gi\|25369825 - pir\|\|C83659 hypothetical protein BH0075 [imported] - Bacillus halodurans (strain C-125) gi\|10172687, gi\|... - gi\|15612638\|ref\|NP_240941.1\| hypothetical protein BH0075 [Bacillus halodurans C-125], gi\|10172687\|db...	174.0	[0..1]	[185..1]
gi\|89149738, gi\|... - gi\|89202221\|ref\|ZP_01180949.1\| probable membrane protein [Bacillus cereus subsp. cytotoxis NVH 391-9...	173.0	[0..1]	[196..1]
gi\|65317519, gi\|... - gi\|65317519\|ref\|ZP_00390478.1\| hypothetical protein Bant_01000684 [Bacillus anthracis str. A2012], r...	170.0	[0..1]	[196..1]

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Predicted Domain #1

Region A:
Residues: [1-105]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSVQFITM ISMVLSGFYL GIIQQTFRRL TTYWRDNAFL TYFLEIGFWL TQAGVIFYVL  60
   61 YHVNAGEVRL YVLLACLLGF SIYQVFAKKP YIRMLEVIIR IVSSI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	34.552842
Match:	PF09578.1
Description:	No description for PF09578.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [106-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YHFIRRLFDK LLLSPLKWII TLIYRMIKTI FGWIITLLLF ILNVILAPFI WIGKGIYKLI  60
   61 PDSFKKFLKK IAGFYSKIKN ICYRWLQLFR RR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits