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View Structure Prediction Details

Protein: SAC2_ARATH
Organism: Arabidopsis thaliana
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|9294649 - gi|9294649|dbj|BAB02988.1| unnamed protein product [Arabidopsis thaliana]
698.0 [0..1] [808..1]
gi|215768478, gi... - gi|51964610|ref|XP_507089.1| PREDICTED P0007D08.10-1 gene product [Oryza sativa (japonica cultivar-g...
615.0 [0..7] [770..2]
gi|169775859 - gi|169775859|ref|XP_001822396.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83771131 - gi|83771131|dbj|BAE61263.1| unnamed protein product [Aspergillus oryzae]
614.0 [0..1] [802..122]
gi|28923339, gi|... - gi|32418670|ref|XP_329813.1| hypothetical protein [Neurospora crassa], gi|28923339|gb|EAA32532.1| hy...
gi|85104596 - gi|85104596|ref|XP_961768.1| hypothetical protein [Neurospora crassa OR74A]
602.0 [0..7] [794..140]
gi|119175116, gi... - gi|90298625|gb|EAS28256.1| hypothetical protein CIMG_09460 [Coccidioides immitis RS], gi|119175116|r...
601.0 [0..1] [802..771]
gi|111062538 - gi|111062538|gb|EAT83658.1| hypothetical protein SNOG_08490 [Phaeosphaeria nodorum SN15]
599.0 [0..9] [782..677]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASERSIDK EVDMGSSFLQ KFRLYETRSS FYMIGRDKNR TSWRVLKLDR TEPAEVNIYE  60
   61 DSTAYTEAEC FETLRRIHEG NRSSGGLKFV TTCYGIIGFI RFLGPYYMLI ITKRKKLGEI 120
  121 CGHTVYGVAK SKIITIPHAS VLSNVAYSKD EKRYKRLLCT VDLTKDFFFS YSYHIMHTLQ 180
  181 RNLSNNVEGH TYYESM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVWNEYLTRR IRNNVKDCMW TVALVYGFFK QVKLSVSEKN FRLTLISRRS RHYAGTRYLK  60
   61 RGVNEKGRVA NDVETEQIVF EEAQDGNPGR ISSVVQNRGS IPLFWSQETS RLNIKPDIIL 120
  121 SPKDPNFEAT RLHFENLGRR YGNPIIILNL IKTREKRPRE TILRAEFANA IRFINKGLSK 180
  181 EDRLRPLHWD LHKHSRKKGT NVLAILGRLA TYALNLTSIF YC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [419-627]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLTPDLRGEG FQNQNPSTLE NDDGECSTYD PPSKDETAPN LVVENGNDSK DAKEDQQKEV  60
   61 TMLQKGVLRT NCIDCLDRTN VAQYAYGLVA FGRQLHALGL TESTNIDLDN PLAEDLMGIY 120
  121 ETMGDTLALQ YGGSAAHNKI FCERRGQWRA ATQSQEFFRT LQRYYSNAYM DAEKQDAINV 180
  181 FLGYFQPQSD KPALWELGSD QHYNAARFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [628-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANSVPETSRS TMKRSLSESS IISESSPAAL GPVGRHGLAE KDEEVKGLSD SAPEISTSET  60
   61 AKIAASLSAP PPILEELGLD DILENDCFCC DGNGEQCTCA AFDMDWVSSS GNSCEDESCG 120
  121 RATVVRSFET IPESRKIESE ICVVETVGSN SRKGNKEEEE AISGIPEGYV RWVMDEDGHF 180
  181 W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.221849
Match: 1i9yA
Description: Synaptojanin, IPP5C domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle