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View Structure Prediction Details

Protein: gi|31711974, gi|...
Organism: Arabidopsis thaliana
Length: 553 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31711974, gi|....

Description E-value Query
Range
Subject
Range
gi|21592775 - gi|21592775|gb|AAM64724.1| unknown [Arabidopsis thaliana]
876.0 [0..1] [553..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCDCFYWNK GFSELESESS ESKPFSLPSP LPQWPQGRGF ATGRISLGEI QVVKVTEFDR  60
   61 VWKCGTSRGK LRCASFYKPV GIPEGFHCLG HYCQPNNQPL RGFVLAARAN KPGHLADDHR 120
  121 PPLKKPLNYS LVWSSDSDCY FWLPNPPVGY RAVGVIVTDG SEEPEVDEVR CVREDLTESC 180
  181 ETGEKVLGVG SFNVWSTKPC ER

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIWSRGVEVG SFVCSTNDLS SDNKAAMNIA CLKNLDPSLQ GMPNLDQVHA LIHHYGPMVY  60
   61 FHPEETYMPS SVPWFFKNGA LLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [286-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFGKSQGEPI NSAGSNLPAG GENDGSFWID LPEDEEVRSN LKKGNIESSE LYVHVKPALG  60
   61 GIFTDVVMWI FCPFNGPATL KIGLLTVPMN RLGEHVGDWE HFTFRISNFN GDLTQMFFSQ 120
  121 HSGGGWVDVS DLEFVKGSNK PVVYSSKHGH ASFPHPGMYL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [446-553]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGPSKLGIGV RNDVAKSKYM VDSSQRYRIV AAEYLGEGAV SEPYWLQFMR EWGPTIVYDS  60
   61 AAEINKIIDL LPLILRNSFE SLFPIELYGE EGPTGPKEKD NWEGDEIC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle