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View Structure Prediction Details

Protein: NAT5_ARATH
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT5_ARATH.

Description E-value Query
Range
Subject
Range
NAT6_ARATH - Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2
310.0 [0..2] [528..6]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPKSGGDP LPHPPKEQLP DISYCITSPP PWPEAVLLGF QHYLVMLGTT VLIPSALVPQ  60
   61 MGGRNEEKAK LIQTILFVAG LNTLLQTVFG TRLPAVIGAS YTFVPVTISI MLSGRFNDVA 120
  121 DPVERFKRII RATQGALIVA STLQIILGFS GLWRNVVRFL SPLSAAPLVG LVGYGLYELG 180
  181 F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGVAKCIEIG LPGLIILILI SQYMPHVIKG GKHVFARFAV IFSVAIVWLY AFFLTLGGAY  60
   61 NGVGTDTQRS CRTDRAGLIS AAPWIRVPWP FQWGAPLFDA GEAFAMMMAS FVALVESTGA 120
  121 FIAVSRYASA TM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [314-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPSVISRGV GWQGVAILIS GLFGTGIGSS VSVENAGLLA LTKIGSRRVV QISAGFMIFF  60
   61 SILGKFGAVF ASIPSPIIAA LYCLFFAYVG AGGLSLLQFC NLNSFRTLFI LGFSIFLGLS 120
  121 IPQYFNEHTA IKGYGPVHTG ARWFNDMVNV PFSSKAFVGG CVAYLLDTTL HKKDGSIRKD 180
  181 RGKHWWDRFW TFKNDPRTEE FYALPFNLNK YFPSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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