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View Structure Prediction Details

Protein: ACO2M_ARATH
Organism: Arabidopsis thaliana
Length: 990 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ACO2M_ARATH.

Predicted Domain #1
Region A:
Residues: [1-92] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS  60
   61 HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 124.0
Match: 1l5jA
Description: Aconitase B, N-terminal domain; Aconitase B, second N-terminal domain; Aconitase B, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [93-990] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEHPFKGI FTTLPKPGGG EFGKFYSLPA LNDPRVDKLP YSIRILLESA IRNCDNFQVT  60
   61 KEDVEKIIDW EKTSPKQVEI PFKPARVLLQ DFTGVPAVVD LACMRDAMNK LGSDSNKINP 120
  121 LVPVDLVIDH SVQVDVARSE NAVQANMELE FQRNKERFAF LKWGSTAFQN MLVVPPGSGI 180
  181 VHQVNLEYLG RVVFNTKGLL YPDSVVGTDS HTTMIDGLGV AGWGVGGIEA EATMLGQPMS 240
  241 MVLPGVVGFK LAGKMRNGVT ATDLVLTVTQ MLRKHGVVGK FVEFYGNGMS GLSLADRATI 300
  301 ANMSPEYGAT MGFFPVDHVT LQYLKLTGRS DETVAMIEAY LRANNMFVDY NEPQQDRVYS 360
  361 SYLELNLDDV EPCISGPKRP HDRVTLKEMK ADWHSCLDSK VGFKGFAIPK EAQEKVVNFS 420
  421 FDGQPAELKH GSVVIAAITS CTNTSNPSVM LGAGLVAKKA CDLGLQVKPW IKTSLAPGSG 480
  481 VVTKYLLKSG LQEYLNEQGF NIVGYGCTTC IGNSGEINES VGAAITENDI VAAAVLSGNR 540
  541 NFEGRVHPLT RANYLASPPL VVAYALAGTV NIDFETEPIG KGKNGKDVFL RDIWPTTEEI 600
  601 AEVVQSSVLP DMFRATYESI TKGNPMWNKL SVPENTLYSW DPNSTYIHEP PYFKDMTMDP 660
  661 PGPHNVKDAY CLLNFGDSIT TDHISPAGNI QKDSPAAKFL MERGVDRKDF NSYGSRRGND 720
  721 EIMARGTFAN IRIVNKLMNG EVGPKTVHIP SGEKLSVFDA AMRYKSSGED TIILAGAEYG 780
  781 SGSSRDWAAK GPMLQGVKAV IAKSFERIHR SNLVGMGIIP LCFKSGEDAD TLGLTGHERY 840
  841 TIHLPTDISE IRPGQDVTVT TDNGKSFTCT VRFDTEVELA YFNHGGILPY VIRNLSKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2b3xA
Description: Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle