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View Structure Prediction Details

Protein: PDI52_ARATH
Organism: Arabidopsis thaliana
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDI52_ARATH.

Description E-value Query
Range
Subject
Range
gi|114670980 - gi|114670980|ref|XP_001164327.1| PREDICTED: prolyl 4-hydroxylase, beta subunit isoform 5 [Pan troglo...
326.0 [0..25] [439..17]

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Predicted Domain #1
Region A:
Residues: [1-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW  60
   61 CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR KIEIDAFPTL MLYNHGVPME 120
  121 YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR 180
  181 KYKKKAWFAV SKEVSEDTMV SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF 240
  241 LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK 300
  301 QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT 360
  361 EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG QVEEPTGVRT ATAVRERVDQ 420
  421 ATTVPEDESS EHKPSDKKED 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.30103
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle