| Protein: | PUX5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 421 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUX5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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277.0 | [0..1] | [412..1] |
|
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247.0 | [0..66] | [421..2] |
|
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243.0 | [0..66] | [421..2] |
|
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242.0 | [0..66] | [421..2] |
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241.0 | [0..66] | [421..2] |
|
|
240.0 | [0..66] | [421..2] |
|
|
240.0 | [0..66] | [421..2] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MATETNENLI NSFIEITSSS REEANFFLES HTWNLDAAVS TFLDNDAAAA AEPNPTGPPP 60
61 PSSTIAGAQS PSQSHS
|
| Detection Method: |  |
| Confidence: | 15.522879 |
| Match: | 2dzlA |
| Description: | No description for 2dzlA was found. |
|
Region A: Residues: [77-163] |
1 11 21 31 41 51
| | | | | |
1 PDYTPSETSP SPSRSRSASP SSRAAPYGLR SRGGAGENKE TENPSGIRSS RSRQHAGNIR 60
61 TFADLNRSPA DGEGSDSDEA NEYYTGG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.379 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.309 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.283 | a.242.1 | Description not found. |
| View | Download | 0.272 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.252 | a.218.1 | Description not found. |
| View | Download | 0.219 | d.58.48 | MTH1187-like |
|
Region A: Residues: [164-318] |
1 11 21 31 41 51
| | | | | |
1 QKSGMMVQDP KKVKDVDELF DQARQSAVDR PVEPSRSAST SFTGAARLLS GEAVSSSPQQ 60
61 QQQEQPQRIM HTITFWLNGF TVNDGPLRGF SDPENAAFMN SISRSECPSE LEPADKKIPV 120
121 HVDLVRRGEN FTEPPKPKNP FQGVGRTLGA SGSGS
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1ss6A |
| Description: | Solution structure of SEP domain from human p47 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-421] |
1 11 21 31 41 51
| | | | | |
1 SSAPQASSAP MNVAPAPSRG LVVDPAAPTT SIQLRLADGT RLVSRFNNHH TVRDVRGFID 60
61 ASRPGGSKEY QLLTMGFPPK QLTELDQTIE QAGIANAVVI QKF
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1s3sG |
| Description: | Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C |
Matching Structure (courtesy of the PDB): |
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