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View Structure Prediction Details

Protein: PAP5_ARATH
Organism: Arabidopsis thaliana
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAP5_ARATH.

Description E-value Query
Range
Subject
Range
PAP4_ARATH - Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1
305.0 [0..1] [234..1]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPWCLKTG VLTSPAAGFN HPSDSGFAVP TKLLSIRKGD RERLRIQAVF SFPPRNGGAE  60
   61 KRKQLKHELV EAIEPLERGA TASPDDQLLI DQLARKVEAV NPTKEPLKSD LINGKWELIY 120
  121 TTSAAILQAK KPRFLRSLTN YQCINMDTLK VQRMETWPFY NSVTGDLTPL NSKTVAVKLQ 180
  181 VFKILGFIPV KAPDGTARGE LEITYVDEEL RISRGKGNLL FILKMFDPTY RIPL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 50.455932
Match: PF04755.3
Description: No description for PF04755.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle