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View Structure Prediction Details

Protein: AROC_ARATH
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AROC_ARATH.

Description E-value Query
Range
Subject
Range
AROC_ARATH - (P57720) Chorismate synthase, chloroplast precursor (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate...
702.0 [0..1] [436..1]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLTSKS ILGSTKLGSS SLPSELRRLS SPAVQISLRT QTRKNFQIQA TGSSYGTHFR  60
   61 VSTFGESHGG GVGCIIDGCP PRIPLTESDL QFDLDRRRPG QSRITTPRKE TDTCRISSGV 120
  121 SEGMTTGTPI HVFVPNTDQR GLDYSEMSVA YRPSHADATY DMKYGVRSVQ GGGRSSARET 180
  181 IGRVAPGALA KKILKQFAGT EILAYVSQVH HVVLPEELVD HENLTLEQIE NNIVRCPNPE 240
  241 YAEKMIAAID AVRTKGNSVG GVVTCIVRNA PRGLGTPVFD KLEAELAKAC MSLPATKGFE 300
  301 FGSGFAGTFL TGLEHNDEFY TDENGRIRTR TNRSGGIQGG ISNGEIINMR VAFKPTSTIG 360
  361 RKQNTVTRDK VETEMIARGR HDPCVVPRAV PMVEAMVALV LVDQLMAQYA QCHLFPINPE 420
  421 LQEPLQIEQP QNATAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 157.0
Match: 1r52A
Description: Crystal structure of the bifunctional chorismate synthase from Saccharomyces cerevisiae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chorismate synthase activity 5.15976990017342 bayes_pls_golite062009
carbon-oxygen lyase activity, acting on phosphates 4.26558071446785 bayes_pls_golite062009
catalytic activity 1.94308403509017 bayes_pls_golite062009
carbon-oxygen lyase activity 1.59965915025616 bayes_pls_golite062009
lyase activity 1.53765291169529 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle