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View Structure Prediction Details

Protein: CE37428
Organism: Caenorhabditis elegans
Length: 484 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37428.

Description E-value Query
Range
Subject
Range
CE37427 - status:Confirmed UniProt:Q65XX9 protein_id:AAU20834.1
313.0 [0..1] [484..131]

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Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRNTTSQHG GLFVSAPGKI ILFGEHAVVY GRTAIAGSID LRTYVSLYTS ADGRIYLSLP  60
   61 DLGVEKTWML KDLLKAADRL AAEYPIEEDQ PPSLEILVPI ARKLSGSCED QCGVQHLAIL 120
  121 AFWYLLLGVA HRKRDLLAVK ATVRFKLPSC VGLGSSGAYC VCIATSLLQT AGLIPPPSIV 180
  181 ADEQGNLTWE EDHLDIIRKW ATAAESLIHG RASGLDAAVC TFGGVASFKP GHRIEHLKNL 240
  241 PDLRVILVNS KVERNTARMV QTVKERLKKF PEVVDAMFGS IDAISLDAAK ILHRPLLEEN 300
  301 GGGDTGSTVQ ENGLGPFGGN MVEQDHHSLQ PTRTASVRSS SLSSYVGGGK RNSSASVISA 360
  361 TSEKGENVDT FSKLNDLCRI NNQLLIALGV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.39794
Match: 1kvkA
Description: Mevalonate kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.306083871041672 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [391-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHPKVDLICT TLARYGIHPK MTGAGGGGSV FAFLKPNTPQ TLLDMIDGEL RSHGFEVWQP  60
   61 PLGGPGVVEH QTRPELFQTP VSSTQCSTPA SKHK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.91
Match: 1kvkA
Description: Mevalonate kinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle