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View Structure Prediction Details

Protein: NDT2_ARATH
Organism: Arabidopsis thaliana
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|109012617 - gi|109012617|ref|XP_001083681.1| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...
298.0 [0..8] [306..166]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEHGNSTFD YRSIREVAAN AGAGATAGAI AATFVCPLDV IKTRLQVLGL PEAPASGQRG  60
   61 GVIITSLKNI IKEEGYRGMY RGLSPTIIAL LPNWAVYFSV YGKLKDVLQS SDGKLSIGSN 120
  121 MIAAAGAGAA TSIATNPLWV VKTRLMTQGI RPGVVPYKSV MSAFSRICHE EGVRGLYSGI 180
  181 LPSLAGVSHV AIQFPAYEKI KQYMAKMDNT SVENLSPGNV AIASSIAKVI ASILTYPHEV 240
  241 IRAKLQEQGQ IRNAETKYSG VIDCITKVFR SEGIPGLYRG CATNLLRTTP SAVITFTTYE 300
  301 MMLRFFRQVV PPETNRSDDR RREEERKNLV SRRGEEEDKD LGLRESQTQS NKISTPHIPL 360
  361 GSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle