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View Structure Prediction Details

Protein: URH2_ARATH
Organism: Arabidopsis thaliana
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for URH2_ARATH.

Description E-value Query
Range
Subject
Range
URH1_ARATH - Uridine nucleosidase 1 OS=Arabidopsis thaliana GN=URH1 PE=1 SV=2
372.0 [0..3] [321..18]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIGDRKKII IDTDPGIDDA MAIFVALNSP EVDVIGLTTI FGNVYTTLAT RNALHLLEVA  60
   61 GRTDIPVAEG THKTFLNDTK LRIADFVHGK DGLGNQNFPP PKGKPIEKSG PEFLVEQAKL 120
  121 CPGEITVVAL GPLTNLALAV QLDPEFSKNV GQIVLLGGAF AVNGNVNPAS EANIFGDPEA 180
  181 ADIVFTCGAD IIAVGINVTH QVIMTADDKD KLASSKGKLA QYLCKILDVY YDYHLTAYEI 240
  241 KGVYLHDPAT ILAAFLPSLF TYTEGVARVQ TSGITRGLTL LYNNLKRFEE ANEWSDKPTV 300
  301 KVAVTVDAPA VVKLIMDRLM ES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 1yoeA
Description: Crystal structure of a the E. coli pyrimidine nucleoside hydrolase YbeK with bound ribose
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle