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View Structure Prediction Details

Protein: gi|186489462, gi...
Organism: Arabidopsis thaliana
Length: 513 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186489462, gi....

Description E-value Query
Range
Subject
Range
gi|79361222, gi|... - gi|79361222|ref|NP_175269.2| hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrid...
507.0 [0..1] [509..1]
FAN1_ORYSJ - Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp. japonica GN=Os06g0171800 PE=3 SV=1
379.0 [0..1] [509..1]
gi|109080444 - gi|109080444|ref|XP_001109813.1| PREDICTED: similar to C01G5.8 [Macaca mulatta]
336.0 [0..73] [507..162]
gi|58257674 - gi|58257674|dbj|BAA76862.3| KIAA1018 protein [Homo sapiens]
333.0 [0..73] [507..185]
gi|114659867 - gi|114659867|ref|XP_510266.2| PREDICTED: similar to KIAA1018 protein [Pan troglodytes]
330.0 [0..73] [507..162]
FAN1_MOUSE - Fanconi-associated nuclease 1 OS=Mus musculus GN=Fan1 PE=2 SV=2
319.0 [0..73] [507..163]
gi|73951019, gi|... - gi|73951021|ref|XP_856688.1| PREDICTED: similar to C01G5.8 isoform 3 [Canis familiaris], gi|73951019...
312.0 [0..65] [507..163]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTGRESLLR LIGKRRRFLP NRHLLLSAHT PNSLNLEFND YGNLVSLAGD DCRLSEDPTS  60
   61 SDDPSKFSDD LSLSTRKKRR LTQTTLLQSS FLSVPKQLED GLVICTQQKS ILDSETFEFS 120
  121 LVQRSEPSES ICC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVEDGSCSPS REESLKTVTL DEDNGEAIET FIVGRKFSDV QDLEIGGDIF LLRHPENVKD  60
   61 RNAIKVISGD SEMLGYLPKD ISQCLSPLID DYDLKFEGTI TSVPKKSSEA VLIKVVCHKM 120
  121 RSDGWKECEL YGDF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.356547
Match: PF08797.3
Description: No description for PF08797.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPLWEKVLQV VEHQMQFPPK TTRYQLNFNV LLQEVLRSCS HLFTADEKAF LESFPTLSED  60
   61 SQRLFIRLYT R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [339-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGPWFRLSNI SYPEVTDSLQ ALKDLTVRGF MSSVKDANEL DNQKMKEITE LLNVTELRDI  60
   61 LSMNKVFSRT SRKRDLINSL CSCYNDGTRI NLATVILERT GLCAKVSSTA ESLIWRVERL 120
  121 FFLNGEQDLS SFVLLDLGII KYPTYKCIDS EQIFSNRTKL LAYEELHGLT QRWFS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle