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View Structure Prediction Details

Protein: GLYT7_ARATH
Organism: Arabidopsis thaliana
Length: 514 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLYT7_ARATH.

Description E-value Query
Range
Subject
Range
gi|18307504 - gi|18307504|emb|CAD21166.1| SDL-1 protein [Nicotiana plumbaginifolia]
390.0 [0..1] [507..1]
gi|87241462 - gi|87241462|gb|ABD33320.1| IMP dehydrogenase/GMP reductase, putative [Medicago truncatula]
389.0 [0..39] [505..29]
gi|3241943, gi|1... - pir||T02440 hypothetical protein At2g41450 [imported] - Arabidopsis thaliana, gi|3241943|gb|AAC2373...
385.0 [0..20] [435..578]
gi|8467985, gi|3... - gi|8467985|dbj|BAA96586.1| putative SDL-1 protein [Oryza sativa Japonica Group], gi|34904358|ref|NP_...
338.0 [0..46] [513..47]
gi|56679228, gi|... - gi|56697491|ref|YP_167859.1| hypothetical protein SPO2649 [Ruegeria pomeroyi DSS-3], gi|56679228|gb|...
259.0 [0..61] [463..404]
gi|114762834, gi... - gi|114762834|ref|ZP_01442266.1| hypothetical protein R2601_25971 [Roseovarius sp. HTCC2601], gi|1145...
257.0 [0..56] [463..394]
gi|52008844, gi|... - gi|99081614|ref|YP_613768.1| hypothetical protein TM1040_1773 [Silicibacter sp. TM1040], gi|99037894...
253.0 [0..61] [450..398]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLYSSSSS SKPTLSSSPS SSSSSRLFLL VTLLPLSLAC FAFVLQWRGG LDDPVTHWSI  60
   61 DHHEFPGMVT TQEKRSLRRS VSDSGCVDLL GQSRSPSFPY FRNWKFDYHS DL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPRICITTST SAGLEQTLPW IYFHKVIGVS TFYLFVEGKA ASPNVSRVLE TIPGVKVIYR  60
   61 TKELEEKQAK SRIWNETWLS SFFYKPCNYE LFVKQSLNME MAITMAQDAG MEWIIHLDTD 120
  121 ELIHPSGTHE YSLRKLLGNI SADVDVVIFP NYESSVERDD IREPFSEVSM FKKNFDHLLR 180
  181 DVYFGNYKDA TRGNPNYFLT YG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [315-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGKAAARVQD HLRPNGAHRW HNYRKSPNEV KLEEAAVLHY TYPRFSDLTS RRDRCGCKPT  60
   61 KVDVKRCFML EFDRAAFIIA STASSEEMLQ WYREHVVWTD EKLKLKLLRK GILTRIYAPM 120
  121 VIIQELREA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [444-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVFSSVVIAA HKSPSKNSST ADSTSGITRE SSQETGKRRV LEFHLDVDGE SQASAVPPQS  60
   61 PPGLEATQME L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle