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View Structure Prediction Details

Protein: gi|30725586, gi|...
Organism: Arabidopsis thaliana
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30725586, gi|....

Description E-value Query
Range
Subject
Range
gi|18415916, gi|... - gi|94442419|gb|ABF18997.1| At5g08750 [Arabidopsis thaliana], gi|26451043|dbj|BAC42627.1| unknown pro...
365.0 [0..1] [356..1]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKENQLETT NCGVNDHDCP PVKNEELAAE ARYSTDSDSG LPTCRVCHSA ESDRRGDTAL  60
   61 GFLGITPPVP EARKSNVDGT ADDVSKATES 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELKNSVVKSN GRESGFIELT SPDAEVFICT NDIEMGIQQH QDALLELGCS CKNELALVHY  60
   61 ACALKWFLNH GSTVCEICGH PAENIKTADF NKVVIALRDY TAIRERTADG GDQIPVLPVN 120
  121 TDSTIDSDEV AVIRRQRLSE ITSWFGPHSL NNNNNNNSSV AAIPDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #3
Region A:
Residues: [257-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLGVVNFDIL PMENRATKWA VEGTGILLAT GLLTVTLVWL IAPRVGKKTA RSGLHILLGG  60
   61 LCALTIVIFF RFVVLTRIRY GPARYWAILF IFWFLVFGIW ASRSNASHNS P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle