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View Structure Prediction Details

Protein: TYW23_ARATH
Organism: Arabidopsis thaliana
Length: 995 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TYW23_ARATH.

Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP  60
   61 KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN QIDPIDQPSE LVFRFEPLII 120
  121 AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP 180
  181 EYVKFLVDIA NEKMDANRKR TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN 240
  241 GNLYPGVQKE LIPLEKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.69897
Match: 2drvA
Description: No description for 2drvA was found.

Predicted Domain #2
Region A:
Residues: [258-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIVGEPVEKL HLWGHSACTI DESDRKEVIV FGGFGGFGRH ARRNESLLLN PSCGTLKLIA  60
   61 VNESPSARLG HTASMVGDFM FVIGGRADPL NILNDVWRLD ISTGEWSSQR CVGSEFPPRH 120
  121 RHAAASVGTK VYIFGGLYN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.0
Match: 2vpjA
Description: No description for 2vpjA was found.

Predicted Domain #3
Region A:
Residues: [397-751]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKIVSSMHIL DTKDLQWKEV EQQGQWPCAR HSHAMVAYGS QSFMFGGYNG ENVLNDLYSF  60
   61 DVQSCSWKLE VISGKWPHAR FSHSMFVYKH TIGIIGGCPV SQNCQELTLL DLKHRLWRSV 120
  121 RLEFMNKELF VRSTASILGD DLIVIGGGAA CYAFGTKFSE PVKINLVQSV TMSENHLPPQ 180
  181 PEDVSLESNK NNADLKTETS LSQPWVIQLE RKYAKFGKDI LKSFGWLDLE RKVYSNEKGL 240
  241 CICFPVTENF SELFHEKQLL GKDFERSEEN NLTKGLSLKD ISCSAALNLL KEHGAKKLIN 300
  301 VAFEAKKVAK SPLQRMREDI TSILKQKGLP EELLDELPQK WERLGDIVVV PATSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 2cn3A
Description: No description for 2cn3A was found.

Predicted Domain #4
Region A:
Residues: [752-995]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDPTWSSIND EVWCAVSKSL SANRLARQGR VEPNGTRDST LEILVGDNGW VNHRENGILY  60
   61 SFDATKCMFS WGNLSEKLRM GNMACENEVV VDLFAGIGYF VLPFLVRAKA KLVYACEWNP 120
  121 HAIEALRRNV EANSVSERCI ILEGDNRITA PKGVADRVNL GLIPSSEGSW VTAIQALRPE 180
  181 GGILHVHGNV KDSDESSWGE HVTKTLSDIA RAEGRSWEVT VEHIEKVKWY APRIRHLVAD 240
  241 VRCR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 2frnA
Description: Crystal structure of Hypothetical protein PH0793
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle