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View Structure Prediction Details

Protein: B3GTC_ARATH
Organism: Arabidopsis thaliana
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GTC_ARATH.

Description E-value Query
Range
Subject
Range
gi|62088614 - gi|62088614|dbj|BAD92754.1| beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant [Homo sapiens]
251.0 [0..35] [371..3]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV  60
   61 AGTIFALSST GPASVYRCG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSKDTSRVVS ASRKLGGDGG NNGVVVERRK LLGFVGIQTG FDSGDRRTAL RSTWFPSDPD  60
   61 SLLRLEQATG LAFRFVIGKS KDAKKMAELE KEIKEYRDFV LLDTEEEYIR LPYKTLAFFK 120
  121 AAFKLFEADY YVKADDDIYL RPDRLATLLA NERLHSQTYI GCMKKGPVIT DPKLKWYEKQ 180
  181 GNLIGNEYFL HAYGPIYVLS AEIVASLAAA RNGSLRMFNN EDVTIGSWML AMDVHHEDNR 240
  241 ALCDPHCSPK SIAVWDIPKC SGLCDPESRL KELHKTDMCS KSPTLPPDDI DQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle