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View Structure Prediction Details

Protein: gi|17431705
Organism: Ralstonia solanacearum
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17431705.

Description E-value Query
Range
Subject
Range
gi|87200830, gi|... - gi|87200830|ref|YP_498087.1| hypothetical protein Saro_2817 [Novosphingobium aromaticivorans DSM 124...
261.0 [0..7] [215..35]
gi|84712740, gi|... - gi|84712740|ref|ZP_01020620.1| possible acyl transferase [Polaromonas naphthalenivorans CJ2], gi|846...
259.0 [0..4] [215..14]
gi|167425923, gi... - gi|167425923|ref|ZP_02317676.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
gi|167418817, gi... - gi|167418817|ref|ZP_02310570.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
gi|170026328, gi... - gi|170026328|ref|YP_001722833.1| hypothetical protein YPK_4121 [Yersinia pseudotuberculosis YPIII], ...
gi|167468404 - gi|167468404|ref|ZP_02333108.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
gi|186893426, gi... - gi|186893426|ref|YP_001870538.1| hypothetical protein YPTS_0082 [Yersinia pseudotuberculosis PB1/+],...
gi|22123976, gi|... - gi|22123976|ref|NP_667399.1| hypothetical protein y0055 [Yersinia pestis KIM], gi|21956715|gb|AAM836...
gi|25509516 - pir||AB0011 probable transferase [imported] - Yersinia pestis (strain CO92)
gi|150260856, gi... - gi|150260856|ref|ZP_01917584.1| possible transferase [Yersinia pestis CA88-4125], gi|149290264|gb|ED...
gi|115345912, gi... - gi|218927301|ref|YP_002345176.1| hypothetical protein YPO0082 [Yersinia pestis CO92], gi|16120433|re...
gi|51594436, gi|... - gi|51594436|ref|YP_068627.1| hypothetical protein YPTB0078 [Yersinia pseudotuberculosis IP 32953], g...
gi|229706645, gi... - gi|229836197|ref|ZP_04456365.1| possible transferase [Yersinia pestis Pestoides A], gi|229706645|gb|...
gi|162353916, gi... - gi|77633903|ref|ZP_00796016.1| COG0684: Demethylmenaquinone methyltransferase [Yersinia pestis Angol...
gi|165936164, gi... - gi|89103454|ref|ZP_01176031.1| COG0684: Demethylmenaquinone methyltransferase [Yersinia pestis biova...
gi|165989611, gi... - gi|166011465|ref|ZP_02232363.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
gi|229839933, gi... - gi|229839933|ref|ZP_04460092.1| possible transferase [Yersinia pestis biovar Orientalis str. PEXU2],...
gi|117671930, gi... - gi|77630841|ref|ZP_00793427.1| COG0684: Demethylmenaquinone methyltransferase [Yersinia pseudotuberc...
gi|108781363, gi... - gi|108809450|ref|YP_653366.1| hypothetical protein YPA_3459 [Yersinia pestis Antiqua], gi|108781363|...
gi|165926105, gi... - gi|165926105|ref|ZP_02221937.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
gi|229842015, gi... - gi|229842015|ref|ZP_04462170.1| possible transferase [Yersinia pestis biovar Orientalis str. India 1...
gi|108813926, gi... - gi|229904456|ref|ZP_04519567.1| possible transferase [Yersinia pestis Nepal516], gi|229678574|gb|EEO...
gi|167399092, gi... - gi|167399092|ref|ZP_02304616.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
gi|166205055, gi... - gi|166213653|ref|ZP_02239688.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase...
Q66GA4|Q66GA4_YERPS - Possible transferase - Yersinia pseudotuberculosis
gi|145601063, gi... - gi|145601063|ref|YP_001165139.1| hypothetical protein YPDSF_3821 [Yersinia pestis Pestoides F], gi|1...
252.0 [0..9] [215..20]
gi|84668630, gi|... - gi|84683887|ref|ZP_01011790.1| hypothetical protein RB2654_20978 [Rhodobacterales bacterium HTCC2654...
250.0 [0..7] [215..19]
gi|19918963 - gi|19918963|dbj|BAB88738.1| 4-carboxy-4-hydroxy-2-oxoadipate aldolase [Sphingomonas paucimobilis]
249.0 [0..9] [215..19]
gi|15074699 - gi|15074699|emb|CAC46344.1| Demethylmenaquinone methyltransferase [Sinorhizobium meliloti 1021]
gi|15965518 - gi|15965518|ref|NP_385871.1| hypothetical protein SMc00502 [Sinorhizobium meliloti 1021]
247.0 [0..7] [215..12]
gi|72603506, gi|... - gi|89899151|ref|YP_521622.1| hypothetical protein Rfer_0337 [Rhodoferax ferrireducens T118], gi|8934...
247.0 [0..4] [215..12]
gi|83748791, gi|... - gi|83748791|ref|ZP_00945805.1| Hypothetical Protein RRSL_01131 [Ralstonia solanacearum UW551], gi|83...
gi|206592945, gi... - gi|207739565|ref|YP_002257958.1| dimethylmenaquinone methyltransferase; protein [Ralstonia solanacea...
246.0 [0..1] [216..1]
gi|112821458, gi... - gi|113473778|ref|YP_718041.1| hypothetical protein pCAR3_100 [Sphingomonas sp. KA1], gi|112821458|db...
245.0 [0..8] [215..19]
gi|90415599, gi|... - gi|90415599|ref|ZP_01223533.1| hypothetical protein GB2207_09786 [marine gamma proteobacterium HTCC2...
gi|90415599|ref|... - hypothetical protein GB2207_09786 [marine gamma proteobacterium HTCC2207]
243.0 [0..5] [215..12]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTMHLSQDP LAALQRFGTA TIHEAQGQRG AIDPRIAALD PARRLVGRAL TVDMRPSDNL  60
   61 MIHYALTKAR PGDVLVVDAK GFVDAGPWGD ILTLAAQEIG MAGLVIDGAV RDADSIIEMG 120
  121 FPVFCRGLCI KGTNKHQPGR VNVPVVIGGV PIQPGDVMVG DRDGLVVVAA DEVDAVIRAS 180
  181 EARERKEAEM RERLKQGATM VELLGLQDTL NRYGLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 2c5qA
Description: Crystal structure of yeast YER010Cp
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle